Factsheet for TraesCS5A01G213600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear

Predictor Summary:

peroxisome 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, unclear
Any Predictor:	mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G210100.1	Wheat	peroxisome	98.82	98.82
TraesCS5D01G218400.1	Wheat	peroxisome	98.82	98.82
Os09t0440300-01	Rice	cytosol, mitochondrion, peroxisome, plastid	91.94	91.94
Zm00001d005818_P001	Maize	cytosol	91.55	91.19
EER98972	Sorghum	cytosol, peroxisome, plasma membrane	90.77	90.77
HORVU5Hr1G062090.1	Barley	plastid	98.23	87.41
Zm00001d003983_P002	Maize	cytosol	35.76	84.65
GSMUA_Achr8P23610_001	Banana	cytosol, peroxisome, plastid	84.48	83.5
PGSC0003DMT400058895	Potato	cytosol	81.53	81.53
KRH12550	Soybean	mitochondrion	80.55	80.71
KRH37502	Soybean	endoplasmic reticulum	80.55	80.55
VIT_11s0016g00900.t01	Wine grape	cytosol	80.35	80.51
Bra030906.1-P	Field mustard	cytosol, peroxisome, plastid	78.98	79.76
CDY61473	Canola	cytosol, peroxisome, plastid	78.78	79.56
CDY02483	Canola	cytosol, peroxisome, plastid	79.96	79.18
AT1G54100.2	Thale cress	peroxisome	78.78	78.94
Solyc03g122310.2.1	Tomato	nucleus	78.59	75.33
CDY51401	Canola	cytosol	32.02	74.09
Bra037964.1-P	Field mustard	cytosol	31.24	69.13
Zm00001d050495_P001	Maize	plastid	30.26	51.33
Zm00001d008814_P001	Maize	cytosol	16.31	37.39
TraesCS3A01G417200.1	Wheat	cytosol	27.31	27.8
TraesCS1A01G310600.1	Wheat	peroxisome	26.92	27.62
TraesCS6A01G155500.1	Wheat	mitochondrion	28.49	27.57
TraesCS6A01G371100.1	Wheat	golgi, nucleus, unclear	27.11	27.49
TraesCS3A01G212300.1	Wheat	peroxisome	26.52	26.84
TraesCS7A01G210100.1	Wheat	mitochondrion	28.68	26.59
TraesCS7A01G369400.1	Wheat	unclear	25.74	25.44
TraesCS2A01G336000.1	Wheat	peroxisome	27.11	25.37
TraesCS7A01G369300.1	Wheat	peroxisome	26.52	24.28
TraesCS2A01G190700.1	Wheat	cytosol	23.38	23.99
TraesCS2A01G477900.1	Wheat	mitochondrion	24.16	23.08
TraesCS2A01G096000.1	Wheat	vacuole	20.63	17.68

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_GLU
InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	PFAM:PF00171
ScanProsite:PS00687	PANTHER:PTHR43521	PANTHER:PTHR43521:SF1	SUPFAM:SSF53720	EnsemblPlantsGene:TraesCS5A01G213600	EnsemblPlants:TraesCS5A01G213600.1
TIGR:cd07130	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:429245477..429251612

Molecular Weight (calculated)

54367.9 Da

IEP (calculated)

6.182

GRAVY (calculated)

0.120

Length

509 amino acids

Sequence
(BLAST)

001: MASFARQEHQ FLAELGLAPR NPGSFACGAW GGSGPVVTTT NPSNNEVIAE VVEASMDDYE KGMSACFDAA KTWMAVPAPK RGEIVRQIGD ALRAKLHHLG
101: RLLSLEMGKI LPEGIGEVQE IIDMCDYAVG LSRQLNGSII PSERPNHMMM EVWNPLGVVG VITAFNFPCA VLGWNACIAL VCGNCVVWKG APTTPLITIA
201: MTKIVASVFE KNNLPSAIFT AFCGGAEIGQ AIALDTRIPL VSFTGSTKVG QMVQQQVSAR FGKCLLELSG NNAIIVMDDA DIPLAVRSVL FAAVGTAGQR
301: CTTCRRLLLH ESIYQTFLDQ LVEVYKQVRI GDPMEKGTLL GPLHTTTSKE SFLKGIQTIK SQGGKILLGG SAIESEGNFV QPTIVEISPD APVVREELFG
401: PVLYAMKFLT LKEAIEINNS VPQGLSSSIF TRKPDAIFKW IGPHGSDCGI VNVNIPTNGA EIGGAFGGEK ATGGGREAGS DSWKQYMRRA TCTINYGSEL
501: PLAQGINFG

Best Arabidopsis Sequence Match ( AT1G54100.1 )
(BLAST)

001: MGSANNEYEF LSEIGLTSHN LGSYVAGKWQ ANGPLVSTLN PANNQPIAQV VEASLEDYEQ GLKACEEAAK IWMQVTAPKR GDIVRQIGDA LRSKLDYLGR
101: LLSLEMGKIL AEGIGEVQEV IDMCDFAVGL SRQLNGSVIP SERPNHMMLE MWNPLGIVGV ITAFNFPCAV LGWNACIALV CGNCVVWKGA PTTPLITIAM
201: TKLVAEVLEK NNLPGAIFTA MCGGAEIGEA IAKDTRIPLV SFTGSSRVGS MVQQTVNARS GKTLLELSGN NAIIVMDDAD IQLAARSVLF AAVGTAGQRC
301: TTCRRLLLHE SVYDKVLEQL LTSYKQVKIG NPLEKGTLLG PLHTPESKKN FEKGIEVIKS QGGKILTGGK AVEGEGNFVE PTIIEISADA AVVKEELFAP
401: VLYVLKFKSF GEAVAINNSV PQGLSSSIFT RNPENIFRWI GPLGSDCGIV NVNIPTNGAE IGGAFGGEKA TGGGREAGSD SWKQYMRRST CTINYGNELP
501: LAQGINFG

Arabidopsis Description

ALDH7B4ALDH7B4 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F2]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.