Factsheet for TraesCS3A01G417200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G452100.1	Wheat	golgi	98.4	98.4
TraesCS3D01G412700.2	Wheat	golgi	98.0	98.0
HORVU3Hr1G092680.2	Barley	mitochondrion, peroxisome, plastid	95.8	91.24
Os01t0591000-01	Rice	cytosol	87.2	86.85
KXG32803	Sorghum	cytosol	85.4	85.23
KRH48414	Soybean	peroxisome	29.0	73.23
KRH48412	Soybean	nucleus	72.8	72.65
KRH39268	Soybean	nucleus	72.4	72.26
TraesCS1A01G310600.1	Wheat	peroxisome	70.8	71.37
TraesCS3A01G212300.1	Wheat	peroxisome	71.2	70.78
KRH41586	Soybean	nucleus	70.8	70.66
Solyc12g007030.1.1	Tomato	cytosol	70.6	70.6
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	73.0	70.6
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	70.6	70.46
PGSC0003DMT400000852	Potato	cytosol	70.4	70.4
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	70.4	70.26
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	69.8	69.66
KRH60293	Soybean	nucleus	69.8	69.52
KRH48410	Soybean	cytosol	69.4	69.26
AT3G24503.1	Thale cress	peroxisome	69.0	68.86
Zm00001d044339_P003	Maize	cytosol, peroxisome, plasma membrane	79.6	68.27
KRH39270	Soybean	cytosol	68.4	68.26
KRH41589	Soybean	nucleus	68.8	68.12
TraesCS7A01G369400.1	Wheat	unclear	70.0	67.96
TraesCS7A01G369300.1	Wheat	peroxisome	71.6	64.39
KRH60295	Soybean	mitochondrion, plastid	68.8	63.94
TraesCS7A01G210100.1	Wheat	mitochondrion	58.2	53.01
GSMUA_Achr3P26460_001	Banana	cytosol	72.4	46.23
TraesCS6A01G371100.1	Wheat	golgi, nucleus, unclear	39.6	39.44
TraesCS2A01G336000.1	Wheat	peroxisome	42.2	38.79
TraesCS6A01G155500.1	Wheat	mitochondrion	40.4	38.4
TraesCS2A01G190700.1	Wheat	cytosol	29.6	29.84
TraesCS5A01G213600.1	Wheat	golgi, unclear	27.8	27.31
TraesCS2A01G477900.1	Wheat	mitochondrion	28.0	26.27
TraesCS2A01G096000.1	Wheat	vacuole	27.6	23.23

Protein Annotations

MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF227	SUPFAM:SSF53720
EnsemblPlantsGene:TraesCS3A01G417200	EnsemblPlants:TraesCS3A01G417200.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:+:659524853..659529402

Molecular Weight (calculated)

53963.1 Da

IEP (calculated)

5.880

GRAVY (calculated)

-0.034

Length

500 amino acids

Sequence
(BLAST)

001: MAAANGGKGF EVPELDIKFT KLFINGQFVD AASGKTFETR DPRTGEVIAR IAEGDKADID LAVKAAREAF DNGPWPRMPG CARARIMHKF ADLVDQHVEE
101: LAALDTVDAG KLFMMGKMMD IPGGANLLRY YAGAADKIHG ETLKMTRPLH GYTLKEPVGV VGHIVPWNYP TTMFFFKVSP ALAAGCTMVV KPAEQTPLSA
201: LFYAHLAKEA GIPDGVLNVV PGFGPTAGAA IASHMDVDKI SFTGSTEVGR LVMQAAATSN LKPVSLELGG KSPVIVFDDA DVDMAVNLVN MATYMNKGEI
301: CVAGTRIYVQ EGIYDAFVKK SVELAKKSVV GDPFNPNVHQ GPQVDKDQYE KVLKYIDVGK SEGATLLTGG KPCSDKGYYI EPTIFTDVTD DMSIAQEEIF
401: GPVMALMKFK TVDEVIQKAN STRYGLAAGV VTKNIDTMNT VSRSVRSGVV WVNCYFAFDP DAPFGGCKMS GFGKDMGTDA LEKYLHTKTV VTPLYNTPWL

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.