Factsheet for PGSC0003DMT400000852

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g007030.1.1	Tomato	cytosol	96.8	96.8
KRH48412	Soybean	nucleus	73.6	73.45
KRH39268	Soybean	nucleus	73.0	72.85
GSMUA_Achr6P04810_001	Banana	cytosol	61.8	71.86
KRH41586	Soybean	nucleus	72.0	71.86
KRH60293	Soybean	nucleus	71.6	71.31
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	71.2	71.06
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	71.0	70.86
TraesCS3B01G452100.1	Wheat	golgi	70.8	70.8
TraesCS3A01G417200.1	Wheat	cytosol	70.4	70.4
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	70.4	70.26
GSMUA_Achr5P24920_001	Banana	cytosol	70.8	70.24
KRH48410	Soybean	cytosol	70.2	70.06
TraesCS3D01G412700.2	Wheat	golgi	70.0	70.0
KRH41589	Soybean	nucleus	70.4	69.7
KXG32803	Sorghum	cytosol	69.6	69.46
KRH39270	Soybean	cytosol	69.6	69.46
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	71.6	69.25
Os01t0591000-01	Rice	cytosol	69.2	68.92
AT3G24503.1	Thale cress	peroxisome	69.0	68.86
EES00989	Sorghum	cytosol	67.6	67.06
Os01t0591300-01	Rice	cytosol	67.6	66.67
HORVU3Hr1G092680.2	Barley	mitochondrion, peroxisome, plastid	69.6	66.29
TraesCS1D01G310100.1	Wheat	peroxisome	65.6	66.26
TraesCS1B01G321900.1	Wheat	peroxisome	65.6	66.26
Zm00001d044340_P001	Maize	cytosol	67.4	65.95
TraesCS1A01G310600.1	Wheat	peroxisome	65.2	65.73
TraesCS7B01G259100.1	Wheat	peroxisome	67.4	65.69
TraesCS7D01G353900.1	Wheat	peroxisome	67.4	65.44
HORVU0Hr1G031700.1	Barley	cytosol	65.2	65.33
KRH60295	Soybean	mitochondrion, plastid	70.2	65.24
HORVU1Hr1G068020.1	Barley	cytosol	65.0	65.13
TraesCS3A01G212300.1	Wheat	peroxisome	65.4	65.01
TraesCS7B01G259200.1	Wheat	peroxisome	66.2	64.52
TraesCS7A01G369400.1	Wheat	unclear	66.4	64.47
HORVU0Hr1G028680.4	Barley	peroxisome	54.2	64.37
Zm00001d011259_P001	Maize	cytosol	65.8	64.26
TraesCS7D01G354000.1	Wheat	peroxisome	65.6	63.94
KXG20268	Sorghum	cytosol	65.4	62.76
Zm00001d036933_P001	Maize	cytosol	66.6	62.48
TraesCS7A01G369300.1	Wheat	peroxisome	66.8	60.07
HORVU7Hr1G085120.2	Barley	mitochondrion	66.4	59.5
Zm00001d044339_P003	Maize	cytosol, peroxisome, plasma membrane	65.8	56.43
PGSC0003DMT400062930	Potato	cytosol	55.6	51.96
PGSC0003DMT400010555	Potato	mitochondrion	53.8	50.85
PGSC0003DMT400010556	Potato	plastid	22.6	47.08
PGSC0003DMT400037582	Potato	mitochondrion	55.2	46.46
GSMUA_Achr3P26460_001	Banana	cytosol	70.6	45.08
PGSC0003DMT400083025	Potato	cytosol	41.4	41.07
PGSC0003DMT400063205	Potato	cytosol, peroxisome, plastid	41.0	40.59
PGSC0003DMT400044163	Potato	plastid	36.0	35.09
PGSC0003DMT400027691	Potato	mitochondrion	31.2	29.05
PGSC0003DMT400028915	Potato	cytosol	28.6	28.83
PGSC0003DMT400011970	Potato	endoplasmic reticulum, extracellular, vacuole	29.2	24.62
PGSC0003DMT400058895	Potato	cytosol	25.0	24.56

Protein Annotations

EntrezGene:102591575	MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009699	GO:GO:0009987	GO:GO:0016491
GO:GO:0016620	GO:GO:0019748	GO:GO:0050269	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163
UniProt:M0ZHF7	PFAM:PF00171	EnsemblPlantsGene:PGSC0003DMG400000321	PGSC:PGSC0003DMG400000321	EnsemblPlants:PGSC0003DMT400000852	ScanProsite:PS00070
ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF182	SUPFAM:SSF53720	UniParc:UPI0002948F0F	RefSeq:XP_006353454.1
SEG:seg	:	:	:	:	:

Description

Aldehyde dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400000321]

Coordinates

chr12:+:4625886..4633484

Molecular Weight (calculated)

54688.9 Da

IEP (calculated)

4.861

GRAVY (calculated)

-0.027

Length

500 amino acids

Sequence
(BLAST)

001: MAESNGNSET QFQIPKIKFT KLFINGEFVD SVSGNTFETI DPRNEEVIAR ISEGDKEDVD LAVKAAREAF DDGPWPRLSP SERRRIMLKF ADLIVENAEE
101: IAALDAMDAG KLFAPVKNMD IPAAAEVIRY YAGAADKIHG TTLKMSCELQ GYTLLEPIGV VGHIIPWNFP TQMFVMKVGP ALAAGCTMIV KPAEQTPLSA
201: LYYAQLAKQA GVPDGVINVV TGFGSTAGAA LCSHMDVDKI SFTGSTEVGR LVMQAAALSN LKPVSLELGG KSPFIVFDDV DVDKVAPLAL VGILYNKGEI
301: CVAGSRLFIQ EGIYDKFVKK LEEMAKTWVV GDPFDPNSHQ GPQVDKKQYE RVLSYIEHGK REGAKLLTGG NALDRKGYFI EPTIFIDVED DMTIAKEEIF
401: GPVLAVMKFK TVEEVIKRAN CTNYGLAAGV MTNDLNIANT VSRSIRAGVI WINCYFAFDP DCPYGGYKCS GFERDLGMEG LHKYLQVKSV ATPIYNSPWL

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.