Factsheet for Zm00001d036933_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20268	Sorghum	cytosol	86.3	88.29
TraesCS7B01G259100.1	Wheat	peroxisome	77.3	80.31
TraesCS7D01G353900.1	Wheat	peroxisome	76.55	79.22
TraesCS7A01G369400.1	Wheat	unclear	76.17	78.83
TraesCS7B01G259200.1	Wheat	peroxisome	75.05	77.97
TraesCS7D01G354000.1	Wheat	peroxisome	74.67	77.58
GSMUA_Achr6P04810_001	Banana	cytosol	59.1	73.26
TraesCS7A01G369300.1	Wheat	peroxisome	75.98	72.84
HORVU7Hr1G085120.2	Barley	mitochondrion	76.17	72.76
GSMUA_Achr5P24920_001	Banana	cytosol	65.85	69.64
Zm00001d044340_P001	Maize	cytosol	66.6	69.47
KRH41586	Soybean	nucleus	64.17	68.26
Zm00001d011259_P001	Maize	cytosol	65.1	67.77
KRH60293	Soybean	nucleus	63.41	67.33
KRH39268	Soybean	nucleus	62.66	66.67
PGSC0003DMT400000852	Potato	cytosol	62.48	66.6
KRH48412	Soybean	nucleus	62.1	66.07
Solyc12g007030.1.1	Tomato	cytosol	61.54	65.6
KRH41589	Soybean	nucleus	61.54	64.95
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	60.98	64.87
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	60.79	64.67
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	60.79	64.67
KRH48414	Soybean	peroxisome	23.83	64.14
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	62.1	64.02
KRH48410	Soybean	cytosol	60.04	63.87
AT3G24503.1	Thale cress	peroxisome	59.85	63.67
KRH39270	Soybean	cytosol	59.1	62.87
KRH60295	Soybean	mitochondrion, plastid	61.35	60.78
Zm00001d044339_P003	Maize	cytosol, peroxisome, plasma membrane	60.98	55.75
Zm00001d051754_P003	Maize	cytosol	52.91	48.7
Zm00001d045706_P001	Maize	mitochondrion	50.28	45.73
Zm00001d032257_P001	Maize	extracellular	40.15	42.29
Zm00001d050339_P001	Maize	extracellular	39.77	41.98
Zm00001d025626_P002	Maize	mitochondrion	37.71	39.72
Zm00001d053776_P015	Maize	mitochondrion	36.02	36.43
Zm00001d050428_P003	Maize	cytosol	26.83	28.26
Zm00001d003983_P002	Maize	cytosol	10.69	26.51
Zm00001d019054_P001	Maize	mitochondrion	26.64	26.44
Zm00001d005818_P001	Maize	cytosol	24.95	26.03
Zm00001d022554_P003	Maize	endoplasmic reticulum	26.83	23.87
Zm00001d050495_P001	Maize	plastid	11.07	19.67
Zm00001d008814_P001	Maize	cytosol	4.88	11.71

Protein Annotations

MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	UniProt:A0A1D6LSK8	ProteinID:AQK82429.1	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114
InterPro:IPR016162	InterPro:IPR016163	PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699
PANTHER:PTHR11699:SF157	SUPFAM:SSF53720	UniParc:UPI000842ADC8	EnsemblPlantsGene:Zm00001d036933	EnsemblPlants:Zm00001d036933_P001	EnsemblPlants:Zm00001d036933_T001
SEG:seg	:	:	:	:	:

Description

Aldehyde dehydrogenase family 2 member C4

Coordinates

chr6:+:106777268..106780457

Molecular Weight (calculated)

57278.4 Da

IEP (calculated)

5.570

GRAVY (calculated)

-0.078

Length

533 amino acids

Sequence
(BLAST)

001: MVSESNRGGA DRTTAAGEER GQLLFDVPEI RFTKLFINGS FVDAVSGRTF ETRDPRTGGV IASVAEADKE DVDLAVRAAR AAFDHGEWPR MSGSERGRIM
101: ARLADLVEER ADELAALESL DAGKHPAVTR AVDVGNAAGS LRYFAGAADK IHGETLKMPG QFQGHTLREP LGVAGVIIPW NFPSTMFAVK VAPALAAGCA
201: LVVKPAEQTP LSALYLAQLA KQAGVPDGVI NVVPGFGPTA GAALASHMDV DMASNYRQIS SHYTTGLAFV SFTGSTEVGR LIMKASAESN LKPVYLELGG
301: KSPLIVFDDA DLDMAVELAV GASFFNKGEA CVAASRVYVQ ERVYDRFEER LAERMRSWVV GDPFSDPSAD QGPQVDKAQY ERVLSYIDHG KREGATLLTG
401: GRPCGPEGKG YYIEPTVFTN VKEDMIIAKE EIFGPVMCLM KFKTVEEAIA RANDTRYGLG AGVVTRDLDV ANRVVRSVRA GVVWVNCYFA MGSDCPFGGR
501: KMSGFGKDEG MHALDKYLAV KSVVTPLRAS PWI

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.