Factsheet for Zm00001d019054_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

extracellular: 20408568
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95994	Sorghum	mitochondrion	96.83	96.3
HORVU2Hr1G107520.1	Barley	cytosol, peroxisome	55.12	92.79
Os07t0188800-01	Rice	mitochondrion	90.69	91.2
TraesCS2B01G501200.1	Wheat	golgi, mitochondrion, unclear	90.32	90.82
TraesCS2A01G477900.1	Wheat	mitochondrion	90.13	90.81
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	89.57	90.07
HORVU2Hr1G107550.1	Barley	plasma membrane	90.13	83.45
GSMUA_Achr4P22360_001	Banana	mitochondrion	79.52	79.37
VIT_03s0132g00200.t01	Wine grape	mitochondrion	76.72	76.44
CDX81452	Canola	mitochondrion	74.86	76.28
Bra037214.1-P	Field mustard	mitochondrion	74.67	76.09
CDY37216	Canola	mitochondrion	74.49	75.9
KRH42067	Soybean	mitochondrion	75.98	75.42
KRH49851	Soybean	mitochondrion	75.23	75.23
PGSC0003DMT400027691	Potato	mitochondrion	74.86	74.86
KRH10621	Soybean	cytosol	72.07	74.85
AT2G14170.1	Thale cress	mitochondrion	74.3	65.73
KRH21731	Soybean	cytosol	37.99	65.38
VIT_03s0132g00230.t01	Wine grape	cytosol	52.51	48.79
KRH45519	Soybean	nucleus	63.13	33.8
VIT_00s0218g00070.t01	Wine grape	cytosol	72.07	28.04
Zm00001d003983_P002	Maize	cytosol	10.99	27.44
Zm00001d044340_P001	Maize	cytosol	25.7	27.01
Zm00001d036933_P001	Maize	cytosol	26.44	26.64
Zm00001d051754_P003	Maize	cytosol	28.49	26.42
Zm00001d011259_P001	Maize	cytosol	25.14	26.37
Zm00001d025626_P002	Maize	mitochondrion	24.39	25.89
Zm00001d032257_P001	Maize	extracellular	24.39	25.89
Zm00001d053776_P015	Maize	mitochondrion	25.33	25.81
Zm00001d050339_P001	Maize	extracellular	24.21	25.74
Zm00001d050428_P003	Maize	cytosol	23.65	25.1
Zm00001d045706_P001	Maize	mitochondrion	27.0	24.74
Zm00001d005818_P001	Maize	cytosol	22.72	23.87
Zm00001d044339_P003	Maize	cytosol, peroxisome, plasma membrane	24.39	22.47
Zm00001d050495_P001	Maize	plastid	11.55	20.67
Zm00001d022554_P003	Maize	endoplasmic reticulum	21.79	19.53
Zm00001d008814_P001	Maize	cytosol	4.47	10.81

Protein Annotations

KEGG:00280+1.2.1.27	KEGG:00640+1.2.1.27	EntrezGene:100274311	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.7.6.3
InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	UniProt:B4G066
EMBL:BT042754	EMBL:BT067832	GO:GO:0003674	GO:GO:0003824	GO:GO:0004491	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	InterPro:MeMal-semiAld_DH	ProteinID:ONM52035.1	PFAM:PF00171
ScanProsite:PS00070	PANTHER:PTHR43866	PANTHER:PTHR43866:SF5	SUPFAM:SSF53720	TIGRFAMs:TIGR01722	UniParc:UPI00017B7B37
EnsemblPlantsGene:Zm00001d019054	EnsemblPlants:Zm00001d019054_P001	EnsemblPlants:Zm00001d019054_T001	SEG:seg	:	:

Description

Methylmalonate-semialdehyde dehydrogenase [acylating] mitochondrial

Coordinates

chr7:+:14302767..14311590

Molecular Weight (calculated)

57521.1 Da

IEP (calculated)

6.772

GRAVY (calculated)

0.007

Length

537 amino acids

Sequence
(BLAST)

001: MLRSALFRSA PGLRRSPATA HLSTAAAAAA AWLSNGPASA PSRVRLLIGG EFVESRADEH VDVTNPATQE VVSRIPLTTA DEFKAAVDAA RTAFPGWRNT
101: PVTTRQRVMF KFQELIRANM DKLAENITTE QGKTLKDAWG DVFRGLEVVE HACGMGTLQM GEYVSNVSNG IDTFSIREPL GVCAGICPFN FPAMIPLWMF
201: PIAVTCGNTF VLKPSEKDPG AAMMLAELAM EAGLPKGVLN IVHGTNDVVN NICDDEDIKA VSFVGSNTAG MHIYSRASAA GKRVQCNMGA KNHAIILPDA
301: DRDATLNALI AAGFGAAGQR CMALSTAVFV GGSESWEDEL VKRASGLVVS SGMVNDADLG PVISRQAKDR ICKLVQSGVD SGARILLDGR KIVVPRYEDG
401: NFVGPTILAD VKSDMECYKE EIFGPVLLLM KAESLEDAIQ IINRNKYGNG ASIFTTSGVS ARKFQTDIEA GQVGINVPIP VPLPFFSFTG SKASFAGDLN
501: FYGKAGVQFF TQIKTITQQW KESPVQRVSL SMPTSQK

Best Arabidopsis Sequence Match ( AT2G14170.1 )
(BLAST)

001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ

Arabidopsis Description

ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.