CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49851	Soybean	mitochondrion	89.75	86.41
KRH42067	Soybean	mitochondrion	88.97	85.03
KRH21731	Soybean	cytosol	48.74	80.77
VIT_03s0132g00200.t01	Wine grape	mitochondrion	83.95	80.52
CDX81452	Canola	mitochondrion	81.62	80.08
Bra037214.1-P	Field mustard	mitochondrion	81.43	79.89
CDY37216	Canola	mitochondrion	81.24	79.7
PGSC0003DMT400027691	Potato	mitochondrion	82.4	79.33
GSMUA_Achr4P22360_001	Banana	mitochondrion	80.66	77.51
HORVU2Hr1G107520.1	Barley	cytosol, peroxisome	46.23	74.92
Os07t0188800-01	Rice	mitochondrion	75.24	72.85
TraesCS2A01G477900.1	Wheat	mitochondrion	74.85	72.61
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	74.66	72.28
TraesCS2B01G501200.1	Wheat	golgi, mitochondrion, unclear	74.66	72.28
Zm00001d019054_P001	Maize	mitochondrion	74.85	72.07
EER95994	Sorghum	mitochondrion	75.24	72.04
AT2G14170.1	Thale cress	mitochondrion	80.85	68.86
HORVU2Hr1G107550.1	Barley	plasma membrane	73.89	65.86
KRH45519	Soybean	nucleus	68.86	35.49
KRH03318	Soybean	mitochondrion	26.89	30.82
KRH48410	Soybean	cytosol	29.79	30.74
KRH41589	Soybean	nucleus	29.79	30.5
KRH39270	Soybean	cytosol	29.4	30.34
KRH41586	Soybean	nucleus	29.21	30.14
KRH48412	Soybean	nucleus	29.01	29.94
KRH60293	Soybean	nucleus	29.01	29.88
KRH48414	Soybean	peroxisome	11.41	29.8
KRH39268	Soybean	nucleus	28.82	29.74
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	29.59	29.59
KRH20324	Soybean	mitochondrion	30.37	29.07
KRH45689	Soybean	nucleus	29.98	28.92
KRG93347	Soybean	peroxisome	29.4	28.79
KRG99327	Soybean	mitochondrion	29.79	28.73
KRH60295	Soybean	mitochondrion, plastid	29.59	28.44
KRH54453	Soybean	endoplasmic reticulum	27.66	28.43
KRH69545	Soybean	mitochondrion	29.59	28.39
KRH74615	Soybean	mitochondrion	29.4	28.25
KRH54419	Soybean	nucleus	29.21	27.96
KRH43670	Soybean	mitochondrion	28.82	27.75
KRH13776	Soybean	mitochondrion	28.82	27.75
KRH57015	Soybean	endoplasmic reticulum	25.53	27.05
KRH72280	Soybean	cytosol, nucleus	24.76	25.75
KRH03077	Soybean	cytosol, nucleus	24.76	25.75
KRH05288	Soybean	cytosol	24.56	25.6
KRH63505	Soybean	mitochondrion	21.47	25.0
KRH37502	Soybean	endoplasmic reticulum	23.21	23.58
KRH12550	Soybean	mitochondrion	22.82	23.23
KRH11951	Soybean	endoplasmic reticulum	22.44	19.43
KRH36977	Soybean	endoplasmic reticulum, extracellular, vacuole	21.47	19.01
KRH50740	Soybean	endoplasmic reticulum	21.47	18.59
KRH02344	Soybean	endoplasmic reticulum	21.28	18.46

Protein Annotations

KEGG:00280+1.2.1.27	KEGG:00640+1.2.1.27	EntrezGene:100783569	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.7.6.3
EMBL:ACUP02009149	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom
EnsemblPlantsGene:GLYMA_15G058900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004491	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	UniProt:K7M9V5
EnsemblPlants:KRH10621	ProteinID:KRH10621	ProteinID:KRH10621.1	ProteinID:KRH10622.1	ProteinID:KRH10623.1	InterPro:MeMal-semiAld_DH
PFAM:PF00171	ScanProsite:PS00070	PANTHER:PTHR43866	PANTHER:PTHR43866:SF5	MetaCyc:PWY-5642	MetaCyc:PWY-6373
SUPFAM:SSF53720	TIGRFAMs:TIGR01722	UniParc:UPI000233B5FD	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:-:4545863..4553298

Molecular Weight (calculated)

55544.8 Da

IEP (calculated)

6.429

GRAVY (calculated)

-0.004

Length

517 amino acids

Sequence
(BLAST)

001: MANSHLSTPS ELFSRQHKPP RVPNLIGGSF LDSKSLTFID VINPATQEVV SQVPCTTDEE FKAAVSAAKK AFPSWRKTPI TKRQRVMLKF QELIRRDMDK
101: LALNVTTEQG KTLKDAQGDV FRGLEVVEHA CGMATLQMGE YVSDVSSGID TYSIREPLGV CAGICPFNFP AMIPLWMFPV AVTCGNTFIL KPSEKVPGAS
201: VMLAELAMEA GLPEGVLNIV HGTHDIVNAI CDDDDIKAIS FVGSNVAGMH IYARAAAKGK RVQANMGAKN HAVVMPDASV DATVNALVAA GFGAAGQRCM
301: ALSTVVFVGD SKLWESKLVE HAKALKVNVG TEPDADLGPV ISKQAKERIH RLIQSGVESG ARLVLDGRNI VVPGYESGNF IGPTILSDVT ANMECYKEEI
401: FGPVLLLTEA DNLEEAINII NENKYGNGAS IFTTSGVAAR KFQTEIEAGQ VGINVPIPVP LPFFSFTGNK ASFAGDLNFY GKAGVNFYTQ IKTVTQQWKD
501: SASESKINLA MPTSQKS

Best Arabidopsis Sequence Match ( AT2G14170.1 )
(BLAST)

001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ

Arabidopsis Description

ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.