CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03077	Soybean	cytosol, nucleus	98.79	98.79
Solyc07g005390.2.1	Tomato	cytosol, extracellular, nucleus, plastid	92.96	93.15
PGSC0003DMT400028915	Potato	cytosol	92.76	92.94
VIT_11s0037g00070.t01	Wine grape	cytosol	92.35	92.54
HORVU2Hr1G036110.7	Barley	cytosol	90.74	90.93
TraesCS2B01G216400.1	Wheat	cytosol	90.34	90.52
GSMUA_Achr7P19330_001	Banana	cytosol	90.34	90.34
Bra007862.1-P	Field mustard	cytosol	90.14	90.32
TraesCS2A01G190700.1	Wheat	cytosol	90.14	90.32
GSMUA_Achr6P01980_001	Banana	cytosol	90.14	90.32
TraesCS2D01G197300.1	Wheat	golgi	90.14	90.32
Bra032110.1-P	Field mustard	cytosol	90.14	90.32
Os08t0440800-01	Rice	extracellular, plasma membrane	90.54	90.18
EES13911	Sorghum	cytosol	90.14	89.96
CDY34779	Canola	peroxisome	90.34	89.26
CDY20292	Canola	cytosol	90.14	89.07
KRH05288	Soybean	cytosol	88.73	88.91
Zm00001d050428_P003	Maize	cytosol	89.74	88.14
CDY46134	Canola	peroxisome	56.54	87.81
CDY55249	Canola	cytosol	76.86	87.02
AT2G24270.2	Thale cress	cytosol	90.34	83.77
KRH54453	Soybean	endoplasmic reticulum	30.78	30.42
KRH48414	Soybean	peroxisome	12.07	30.3
KRH60293	Soybean	nucleus	29.98	29.68
KRH41586	Soybean	nucleus	29.78	29.54
KRH03318	Soybean	mitochondrion	26.76	29.49
KRH57015	Soybean	endoplasmic reticulum	28.77	29.3
KRH39270	Soybean	cytosol	28.97	28.74
KRH48410	Soybean	cytosol	28.97	28.74
KRH48412	Soybean	nucleus	28.97	28.74
KRG99327	Soybean	mitochondrion	30.99	28.73
KRH39268	Soybean	nucleus	28.77	28.54
KRH45689	Soybean	nucleus	30.38	28.17
KRH41589	Soybean	nucleus	28.37	27.92
KRG93347	Soybean	peroxisome	29.58	27.84
KRH74615	Soybean	mitochondrion	29.78	27.51
KRH69545	Soybean	mitochondrion	29.58	27.27
KRH20324	Soybean	mitochondrion	29.58	27.22
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.17	27.08
KRH54419	Soybean	nucleus	29.18	26.85
KRH43670	Soybean	mitochondrion	28.97	26.82
KRH13776	Soybean	mitochondrion	27.97	25.88
KRH60295	Soybean	mitochondrion, plastid	27.97	25.84
KRH10621	Soybean	cytosol	25.75	24.76
KRH63505	Soybean	mitochondrion	21.73	24.32
KRH49851	Soybean	mitochondrion	25.96	24.02
KRH42067	Soybean	mitochondrion	25.96	23.84
KRH50740	Soybean	endoplasmic reticulum	28.17	23.45
KRH21731	Soybean	cytosol	14.69	23.4
KRH02344	Soybean	endoplasmic reticulum	27.57	22.99
KRH11951	Soybean	endoplasmic reticulum	27.16	22.61
KRH36977	Soybean	endoplasmic reticulum, extracellular, vacuole	25.96	22.09
KRH12550	Soybean	mitochondrion	22.13	21.65
KRH37502	Soybean	endoplasmic reticulum	22.13	21.61
KRH45519	Soybean	nucleus	24.35	12.06

Protein Annotations

EntrezGene:100780041	MapMan:2.1.1.4.2	Gene3D:3.40.309.10	Gene3D:3.40.605.10	EMBL:ACUP02001198	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlantsGene:GLYMA_02G202500
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0055114	UniProt:I1JGN1	InterPro:IPR016162	InterPro:IPR016163	EnsemblPlants:KRH72280	ProteinID:KRH72280
ProteinID:KRH72280.1	PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR42991	PANTHER:PTHR42991:SF3
SUPFAM:SSF53720	UniParc:UPI0002337464	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:38754600..38759102

Molecular Weight (calculated)

53254.7 Da

IEP (calculated)

7.177

GRAVY (calculated)

0.031

Length

497 amino acids

Sequence
(BLAST)

001: MAAGTGLFAE ILDGDAYKYY ADGEWKKSAS GKSVSIINPT TRKTQYKVQA CSQEEVNKVM DLAKSAQKLW AKTPLWKRAE LLHKAAAILK EHKTPIAECL
101: VKEIAKPAKD AVMEVVRSGD LVSYTAEEGV RILGEGKFLV SDSFPGNERT KYCLTSKIPL GVILAIPPFN YPVNLAVSKI APALIAGNSI VLKPPTQGAV
201: SALHMVHCFH LAGFPKGLIN CVTGKGSEIG DFLTMHPGVN CISFTGGDTG ISISKKAGMI PLQMELGGKD ACIVLEDADL DLVAANIIKG GFSYSGQRCT
301: AVKVVLVMES VADALVEKVK AKVAKLTVGP PEDDCDITPV VSESSANFIE GLVLDAKEKG ATFCQEYKRE GNLIWPLLLD NVRPDMRIAW EEPFGPVLPV
401: IRINSVEEGI HHCNASNFGL QGCVFTKDVN KAIMISDAME TGTVQINSAP ARGPDHFPFQ GIKDSGIGSQ GITNSINMMT KVKTTVINLP SPSYTMG

Best Arabidopsis Sequence Match ( AT2G24270.2 )
(BLAST)

001: MLFHHSFHKN LSIITSSLSL SLLYNTQEAR HRGEILFQRS MAGTGLFAEI LDGEVYKYYA DGEWKTSSSG KSVAIMNPAT RKTQYKVQAC TQEEVNAVME
101: LAKSAQKSWA KTPLWKRAEL LHKAAAILKD NKAPMAESLV KEIAKPAKDS VTEVVRSGDL ISYCAEEGVR ILGEGKFLLS DSFPGNDRTK YCLTSKIPLG
201: VVLAIPPFNY PVNLAVSKIA PALIAGNSLV LKPPTQGAVS CLHMVHCFHL AGFPKGLISC ITGKGSEIGD FLTMHPAVNC ISFTGGDTGI SISKKAGMIP
301: LQMELGGKDA CIVLDDADLD LVASNIIKGG FSYSGQRCTA VKVVLVMESV ADELVEKVKA KVAKLTVGPP EENSDITAVV SESSANFIEG LVMDAKEKGA
401: TFCQEYKREG NLIWPLLLDN VRPDMRIAWE EPFGPVVPVL RINSVEEGIN HCNASNFGLQ GCVFTKDINK AILISDAMET GTVQINSAPA RGPDHFPFQG
501: LKDSGIGSQG VTNSINLMTK VKTTVINLPT PSYSMG

Arabidopsis Description

ALDH11A3aldehyde dehydrogenase 11A3 [Source:TAIR;Acc:AT2G24270]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.