Factsheet for TraesCS2D01G197300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G216400.1	Wheat	cytosol	99.4	99.4
HORVU2Hr1G036110.7	Barley	cytosol	99.19	99.19
TraesCS2A01G190700.1	Wheat	cytosol	99.19	99.19
EES13911	Sorghum	cytosol	96.37	95.98
Os08t0440800-01	Rice	extracellular, plasma membrane	95.77	95.19
Zm00001d050428_P003	Maize	cytosol	95.97	94.07
GSMUA_Achr7P19330_001	Banana	cytosol	92.34	92.15
GSMUA_Achr6P01980_001	Banana	cytosol	90.93	90.93
PGSC0003DMT400028915	Potato	cytosol	90.93	90.93
VIT_11s0037g00070.t01	Wine grape	cytosol	90.73	90.73
Solyc07g005390.2.1	Tomato	cytosol, extracellular, nucleus, plastid	90.52	90.52
KRH03077	Soybean	cytosol, nucleus	90.52	90.34
KRH72280	Soybean	cytosol, nucleus	90.32	90.14
KRH05288	Soybean	cytosol	88.1	88.1
VIT_04s0008g05810.t01	Wine grape	cytosol	87.5	87.5
Bra032110.1-P	Field mustard	cytosol	87.1	87.1
Bra007862.1-P	Field mustard	cytosol	86.29	86.29
CDY20292	Canola	cytosol	87.1	85.88
CDY34779	Canola	peroxisome	86.49	85.29
CDY46134	Canola	peroxisome	54.23	84.06
CDY55249	Canola	cytosol	73.59	83.14
AT2G24270.2	Thale cress	cytosol	86.69	80.22
TraesCS3D01G412700.2	Wheat	golgi	29.44	29.2
TraesCS6D01G355000.2	Wheat	golgi	28.83	28.43
TraesCS7D01G211900.1	Wheat	mitochondrion	31.45	28.42
TraesCS1D01G310100.1	Wheat	peroxisome	28.23	28.28
TraesCS7D01G353900.1	Wheat	peroxisome	28.83	27.77
TraesCS7D01G354000.1	Wheat	peroxisome	28.63	27.68
TraesCS6D01G272400.1	Wheat	mitochondrion	29.44	26.79
TraesCS2D01G326900.1	Wheat	golgi, unclear	26.61	26.09
TraesCS6D01G145400.4	Wheat	mitochondrion	28.23	25.88
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	25.0	23.22
TraesCS2D01G094400.1	Wheat	golgi	27.22	22.73
TraesCS5D01G218400.1	Wheat	peroxisome	23.19	22.59

Protein Annotations

MapMan:2.1.1.4.2	Gene3D:3.40.309.10	Gene3D:3.40.605.10	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR42991	PANTHER:PTHR42991:SF3	SUPFAM:SSF53720
EnsemblPlantsGene:TraesCS2D01G197300	EnsemblPlants:TraesCS2D01G197300.1	TIGR:cd07082	:	:	:

Description

No Description!

Coordinates

chr2D:+:144441973..144445293

Molecular Weight (calculated)

53050.3 Da

IEP (calculated)

6.832

GRAVY (calculated)

0.029

Length

496 amino acids

Sequence
(BLAST)

001: MAGTGVFADV LDGEVYKYYA DGEWRASASG KTVAIVNPTT RQTQYRVQAC TQEEVNKVMD AAKVAQKAWA RTPLWKRAEL LHKAAAILKE HKTPIAECLV
101: KEIAKPAKDA VSEVVRSGDL VSYTAEEGVR ILGEGKLLVS DSFPGNERNK YCLSSKVPLG VVLAIPPFNY PVNLAVSKIG PALIAGNSLV LKPPTQGAVA
201: ALHMVHCFHL AGFPKGLISC VTGKGSEIGD FLTMHPGVNC ISFTGGDTGI AISKKAGMVP LQMELGGKDA CIVLEDADLD LVAANIVKGG FSYSGQRCTA
301: VKVVLIMEAV ADTVVEKVNA KLAKLKVGPP EDDSDITPVV TESSANFIEG LVMDAKEKGA TFCQEYRREG NLIWPLLLDH VRPDMRIAWE EPFGPVLPVI
401: RINSVEEGIH HCNASNFGLQ GCVFTRDINK AIMISDAMES GTVQINSAPA RGPDHFPFQG LKDSGIGSQG ITNSINMMTK VKSTVINLPS PSYTMG

Best Arabidopsis Sequence Match ( AT2G24270.2 )
(BLAST)

001: MLFHHSFHKN LSIITSSLSL SLLYNTQEAR HRGEILFQRS MAGTGLFAEI LDGEVYKYYA DGEWKTSSSG KSVAIMNPAT RKTQYKVQAC TQEEVNAVME
101: LAKSAQKSWA KTPLWKRAEL LHKAAAILKD NKAPMAESLV KEIAKPAKDS VTEVVRSGDL ISYCAEEGVR ILGEGKFLLS DSFPGNDRTK YCLTSKIPLG
201: VVLAIPPFNY PVNLAVSKIA PALIAGNSLV LKPPTQGAVS CLHMVHCFHL AGFPKGLISC ITGKGSEIGD FLTMHPAVNC ISFTGGDTGI SISKKAGMIP
301: LQMELGGKDA CIVLDDADLD LVASNIIKGG FSYSGQRCTA VKVVLVMESV ADELVEKVKA KVAKLTVGPP EENSDITAVV SESSANFIEG LVMDAKEKGA
401: TFCQEYKREG NLIWPLLLDN VRPDMRIAWE EPFGPVVPVL RINSVEEGIN HCNASNFGLQ GCVFTKDINK AILISDAMET GTVQINSAPA RGPDHFPFQG
501: LKDSGIGSQG VTNSINLMTK VKTTVINLPT PSYSMG

Arabidopsis Description

ALDH11A3aldehyde dehydrogenase 11A3 [Source:TAIR;Acc:AT2G24270]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.