Factsheet for TraesCS2D01G094400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G096000.1	Wheat	vacuole	99.33	99.33
HORVU2Hr1G016040.10	Barley	mitochondrion	94.28	95.08
Os07t0688800-01	Rice	plasma membrane	92.76	92.29
TraesCS2B01G111400.2	Wheat	vacuole	99.16	91.04
EER99950	Sorghum	endoplasmic reticulum	88.55	88.7
Zm00001d022554_P003	Maize	endoplasmic reticulum	87.88	87.15
GSMUA_Achr11P...	Banana	endoplasmic reticulum	83.5	83.5
GSMUA_Achr8P10590_001	Banana	endoplasmic reticulum	81.31	81.18
VIT_05s0077g01060.t01	Wine grape	vacuole	80.3	80.44
Solyc12g099290.1.1	Tomato	plastid	79.29	79.43
PGSC0003DMT400011970	Potato	endoplasmic reticulum, extracellular, vacuole	78.96	79.09
KRH36977	Soybean	endoplasmic reticulum, extracellular, vacuole	76.26	77.57
KRH02344	Soybean	endoplasmic reticulum	77.61	77.35
KRH50740	Soybean	endoplasmic reticulum	77.44	77.05
Bra029596.1-P	Field mustard	vacuole	76.77	76.9
CDY24674	Canola	vacuole	76.6	76.6
CDY05285	Canola	vacuole	76.43	76.56
AT3G66658.2	Thale cress	endoplasmic reticulum, extracellular, vacuole	76.6	76.34
KRH11951	Soybean	endoplasmic reticulum	76.6	76.21
Os07t0689150-00	Rice	endoplasmic reticulum	23.4	74.73
TraesCS6D01G355000.2	Wheat	golgi	25.59	30.22
TraesCS2D01G326900.1	Wheat	golgi, unclear	25.42	29.84
TraesCS3D01G412700.2	Wheat	golgi	24.07	28.6
TraesCS6D01G272400.1	Wheat	mitochondrion	25.25	27.52
TraesCS7D01G211900.1	Wheat	mitochondrion	25.25	27.32
TraesCS2D01G197300.1	Wheat	golgi	22.73	27.22
TraesCS1D01G310100.1	Wheat	peroxisome	22.56	27.07
TraesCS6D01G145400.4	Wheat	mitochondrion	24.58	26.99
TraesCS7D01G354000.1	Wheat	peroxisome	23.23	26.9
TraesCS7D01G353900.1	Wheat	peroxisome	23.23	26.8
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	20.37	22.66
TraesCS5D01G218400.1	Wheat	peroxisome	17.68	20.63

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:35.1	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	PFAM:PF00171
ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF25	SUPFAM:SSF53720	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G094400	EnsemblPlants:TraesCS2D01G094400.1	TIGR:cd07098	:	:

Description

No Description!

Coordinates

chr2D:+:46292116..46298258

Molecular Weight (calculated)

65831.0 Da

IEP (calculated)

7.255

GRAVY (calculated)

0.073

Length

594 amino acids

Sequence
(BLAST)

001: MAFWWPLLVL AAAYALCRVL LFLIPPTVPS MEVDASDVME EVNQNKEDSF IYVPRKGKAA QTDMVRCYEP ATMKYLGYFP ALTPDEVQEH VAQARKAQEV
101: WAKSSFKQRR QFLRILLKYI LEHQDLICEI SSRDTGKTMV DASLGEIMTT CEKIHWLLDE GEKWLKPEYR SCGRSMLHKS AKVEFHPLGV IGAIVSWNYP
201: FHNVFNPMLA AVFSGNAAVI KVSEHASWSG CFYSRIIQAA LLAVGAPDNL VHIVTGFAET GQALVSSVDK IIFVGSPGVG RMIMQKASET LIPVTLELGG
301: KDAFIVCEDV DLPNVVQVAV RAALQSSGQN CAGAERFYVH KDIYPTFVSR VVKIIKSISV GPPLSGRYDM GAICMIEHSE RLQNLVNDAL DKGAEIAVRG
401: SFGNLGEDAV DQFFPPTVLV NVNHTMKIMQ EEAFGPILPI MKFSSDEEVI QLANDSKYGL GCAVFSGNQK RAIKIASQVH CGVAAINDFA SSYMCQSLPF
501: GGVKDSGFGR FAGVEGLRAC CLVKAVVEDR WWPYVKTMIP KPIQYPVSEN GFAFQQLLVE TLYGISVWDR LQSLVNLLKM ISEQKSPITR RKSR

Best Arabidopsis Sequence Match ( AT3G66658.2 )
(BLAST)

001: MPFWWPLIVL AFAYAICKFL LMLIPPNVPS IDVDASDVLA HGKDTEENSF IYIPPRGRSQ QSDKKVQCYE PATMKYLGYF PALSPTEVEE RVTLSRKAQK
101: TWAQSSFKLR RQFLRILLKY IIEHQELICE VSSRDTGKTM VDASLGEIMT TCEKITWLLS EGERWLKPES RSSGRAMLHK VSRVEFHPLG VIGAIVPWNY
201: PFHNIFNPML AAVFSGNGIV IKVSEHASWS GCFYFRIIQA ALAAVGAPEN LVDVITGFAE TGEALVSSVD KMIFVGSTAV GKMIMRNAAE TLTPVTLELG
301: GKDAFIICED ADVSHVAQVA VRGTLQSSGQ NCAGAERFYV HKDIYTAFIG QVTKIVKSVS AGPPLTGRYD MGAICLQEHS EHLQSLVNDA LDKGAEIAVR
401: GSFGHLGEDA VDQYFPPTVL INVNHNMKIM KEEAFGPIMP IMQFSTDEEV IKLANDSRYA LGCAVFSGSK HRAKQIASQI QCGVAAINDF ASNYMCQSLP
501: FGGVKDSGFG RFAGIEGLRA CCLVKSVVED RFWPLIKTKI PKPIQYPVAE NAFEFQEALV ETLYGLNIWD RLRSLIDVLK FLTDQSSNVS RTRKSH

Arabidopsis Description

ALDH22A1Aldehyde dehydrogenase 22A1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WSF1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.