Factsheet for TraesCS7D01G211900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

mitochondrion: 21043471
mitochondrion: 23895732
golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 21043471 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks, M316, The University of Western Australia, 35 Stirling Highway, Crawley,WA 6009, Australia.

msms PMID: 23895732 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks (CABiN), M316, The University of Western Australia , 35 Stirling Highway, Crawley, WA 6009, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G210100.1	Wheat	mitochondrion	99.64	99.64
TraesCS7B01G116800.1	Wheat	mitochondrion	99.27	98.73
HORVU7Hr1G042880.1	Barley	mitochondrion	98.18	98.18
Os06t0270900-01	Rice	mitochondrion	87.98	87.98
KXG19772	Sorghum	mitochondrion	88.89	87.77
GSMUA_Achr3P06170_001	Banana	mitochondrion	82.15	84.77
GSMUA_Achr5P05290_001	Banana	mitochondrion	81.6	82.66
Zm00001d045706_P001	Maize	mitochondrion	86.34	80.89
KRH03318	Soybean	mitochondrion	65.57	79.82
KRG99327	Soybean	mitochondrion	77.78	79.66
KRH45689	Soybean	nucleus	77.6	79.48
TraesCS6D01G272400.1	Wheat	mitochondrion	78.69	79.27
Solyc03g114150.2.1	Tomato	plastid	76.5	78.5
KRH69545	Soybean	mitochondrion	77.05	78.48
PGSC0003DMT400062930	Potato	cytosol	76.14	78.13
KRH74615	Soybean	mitochondrion	76.5	78.07
AT1G23800.1	Thale cress	mitochondrion	75.59	77.72
CDY57318	Canola	mitochondrion	75.96	77.65
VIT_17s0000g08070.t01	Wine grape	mitochondrion	75.96	77.51
Solyc02g086970.2.1	Tomato	cytosol	66.67	77.38
PGSC0003DMT400010555	Potato	mitochondrion	74.32	77.13
CDX91724	Canola	mitochondrion	75.41	77.09
Bra016330.1-P	Field mustard	mitochondrion	75.41	77.09
Solyc05g005700.2.1	Tomato	mitochondrion, unclear	74.13	76.94
VIT_01s0137g00080.t01	Wine grape	cytosol	55.37	76.77
VIT_14s0066g01550.t01	Wine grape	mitochondrion	74.68	76.64
Bra024619.1-P	Field mustard	mitochondrion	74.68	76.49
VIT_01s0026g00220.t01	Wine grape	mitochondrion	75.77	76.33
CDY47634	Canola	mitochondrion	75.05	75.74
Solyc08g068190.2.1	Tomato	nucleus, unclear	73.22	75.28
KRH54419	Soybean	nucleus	73.59	74.81
KRH20324	Soybean	mitochondrion	73.41	74.63
CDY61548	Canola	cytosol, peroxisome	73.77	72.97
PGSC0003DMT400010556	Potato	plastid	31.69	72.5
KRG93347	Soybean	peroxisome	69.03	71.78
KRH63505	Soybean	mitochondrion	57.38	70.95
PGSC0003DMT400037582	Potato	mitochondrion	72.31	66.83
VIT_01s0026g00210.t01	Wine grape	cytosol	63.75	59.63
TraesCS3D01G412700.2	Wheat	golgi	53.01	58.2
TraesCS1D01G310100.1	Wheat	peroxisome	51.73	57.37
TraesCS7D01G353900.1	Wheat	peroxisome	50.27	53.59
TraesCS7D01G354000.1	Wheat	peroxisome	49.73	53.22
TraesCS2D01G326900.1	Wheat	golgi, unclear	38.25	41.5
TraesCS6D01G355000.2	Wheat	golgi	36.98	40.36
TraesCS6D01G145400.4	Wheat	mitochondrion	35.7	36.23
TraesCS2D01G197300.1	Wheat	golgi	28.42	31.45
TraesCS5D01G218400.1	Wheat	peroxisome	26.59	28.68
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	27.32	28.09
TraesCS2D01G094400.1	Wheat	golgi	27.32	25.25

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF225	SUPFAM:SSF53720
EnsemblPlantsGene:TraesCS7D01G211900	EnsemblPlants:TraesCS7D01G211900.1	TIGR:cd07142	SEG:seg	:	:

Description

No Description!

Coordinates

chr7D:+:170225052..170229492

Molecular Weight (calculated)

59268.1 Da

IEP (calculated)

6.853

GRAVY (calculated)

-0.044

Length

549 amino acids

Sequence
(BLAST)

001: MAAAATRRAA SSLASRCLLS RPAASPAAVP SALRRADGAR GLLPGLLQRF GTAAAAEEPI SPSVQVGETQ LLINGKFVDA ASGKTFPTVD PRTGEVIARV
101: AEGDAEDVDR AVVAARKAFD EGPWPRMTAY ERSRILLRFA DLIEKHNDDI AALETWDNGK PYEQAAHIEV PMLARLMRYY AGWTDKIHGL IVPADGPHHV
201: QVLHEPIGVV GQIIPWNFPL LMYGWKVGPA LACGNTIVLK TAEQTPLSAL YVSKLLHEAG LPEGVLNIVS GFGPTAGAAL ASHMDVDKIA FTGSTDTGKV
301: ILELSARSNL KPVTLELGGK SPFIVMDDAD IDQAVELAHF ALFFNQGQCC CAGSRTFVHE RVYDEFVEKS KARALKRVVG DPFRKGVEQG PQIDDEQFKK
401: ILRYIKSGVD SGATLVTGGD KLGDKGYYIQ PTIFSDVQDG MKIAQEEIFG PVQSIFKFND LNEVIKRANA SQYGLAAGVF TNNLDTANTL TRALRAGTVW
501: VNCFDIFDAA IPFGGYKMSG IGREKGIDSL KNYLQVKAVV TALKNPAWL

Best Arabidopsis Sequence Match ( AT3G48000.1 )
(BLAST)

001: MAARRVSSLL SRSFSASSPL LFRSQGRNCY NGGILRRFGT SSAAAEEIIN PSVQVSHTQL LINGNFVDSA SGKTFPTLDP RTGEVIAHVA EGDAEDINRA
101: VKAARTAFDE GPWPKMSAYE RSRVLLRFAD LVEKHSEELA SLETWDNGKP YQQSLTAEIP MFARLFRYYA GWADKIHGLT IPADGNYQVH TLHEPIGVAG
201: QIIPWNFPLL MFAWKVGPAL ACGNTIVLKT AEQTPLTAFY AGKLFLEAGL PPGVLNIVSG FGATAGAALA SHMDVDKLAF TGSTDTGKVI LGLAANSNLK
301: PVTLELGGKS PFIVFEDADI DKAVELAHFA LFFNQGQCCC AGSRTFVHEK VYDEFVEKSK ARALKRVVGD PFRKGIEQGP QIDLKQFEKV MKYIKSGIES
401: NATLECGGDQ IGDKGYFIQP TVFSNVKDDM LIAQDEIFGP VQSILKFSDV DEVIKRANET KYGLAAGVFT KNLDTANRVS RALKAGTVWV NCFDVFDAAI
501: PFGGYKMSGN GREKGIYSLN NYLQIKAVVT ALNKPAWI

Arabidopsis Description

ALDH2B4Aldehyde dehydrogenase family 2 member B4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SU63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.