Factsheet for TraesCS6D01G272400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G072830.2	Barley	peroxisome	91.38	97.08
TraesCS6B01G321400.1	Wheat	mitochondrion	75.23	95.57
Os02t0730000-02	Rice	mitochondrion	86.06	84.81
KXG30827	Sorghum	mitochondrion, plastid	83.49	82.58
TraesCS7D01G211900.1	Wheat	mitochondrion	79.27	78.69
GSMUA_Achr3P06170_001	Banana	mitochondrion	76.33	78.2
Zm00001d051754_P003	Maize	cytosol	81.83	77.03
GSMUA_Achr5P05290_001	Banana	mitochondrion	76.33	76.75
KRH03318	Soybean	mitochondrion	62.57	75.61
KRG99327	Soybean	mitochondrion	73.21	74.44
KRH45689	Soybean	nucleus	73.03	74.25
VIT_14s0066g01550.t01	Wine grape	mitochondrion	72.48	73.83
Solyc02g086970.2.1	Tomato	cytosol	64.04	73.78
PGSC0003DMT400010555	Potato	mitochondrion	71.56	73.72
VIT_01s0026g00220.t01	Wine grape	mitochondrion	73.58	73.58
Solyc05g005700.2.1	Tomato	mitochondrion, unclear	71.38	73.53
Solyc03g114150.2.1	Tomato	plastid	72.11	73.46
PGSC0003DMT400062930	Potato	cytosol	72.11	73.46
KRH74615	Soybean	mitochondrion	72.29	73.23
VIT_01s0137g00080.t01	Wine grape	cytosol	53.21	73.23
VIT_17s0000g08070.t01	Wine grape	mitochondrion	72.11	73.05
KRH69545	Soybean	mitochondrion	72.11	72.91
AT1G23800.1	Thale cress	mitochondrion	71.38	72.85
CDY57318	Canola	mitochondrion	71.74	72.81
KRH54419	Soybean	nucleus	72.11	72.78
Bra024619.1-P	Field mustard	mitochondrion	71.38	72.57
Bra016330.1-P	Field mustard	mitochondrion	71.38	72.44
CDX91724	Canola	mitochondrion	71.19	72.25
CDY47634	Canola	mitochondrion	71.74	71.88
Solyc08g068190.2.1	Tomato	nucleus, unclear	69.17	70.6
KRH20324	Soybean	mitochondrion	69.17	69.81
CDY61548	Canola	cytosol, peroxisome	70.46	69.19
KRH63505	Soybean	mitochondrion	55.96	68.69
KRG93347	Soybean	peroxisome	66.42	68.56
PGSC0003DMT400010556	Potato	plastid	30.09	68.33
PGSC0003DMT400037582	Potato	mitochondrion	69.54	63.8
TraesCS1D01G310100.1	Wheat	peroxisome	51.93	57.17
TraesCS3D01G412700.2	Wheat	golgi	52.11	56.8
VIT_01s0026g00210.t01	Wine grape	cytosol	60.73	56.39
TraesCS7D01G353900.1	Wheat	peroxisome	50.64	53.59
TraesCS7D01G354000.1	Wheat	peroxisome	50.09	53.22
TraesCS2D01G326900.1	Wheat	golgi, unclear	37.06	39.92
TraesCS6D01G355000.2	Wheat	golgi	36.33	39.36
TraesCS6D01G145400.4	Wheat	mitochondrion	35.23	35.49
TraesCS2D01G197300.1	Wheat	golgi	26.79	29.44
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	27.71	28.28
TraesCS5D01G218400.1	Wheat	peroxisome	26.05	27.9
TraesCS2D01G094400.1	Wheat	golgi	27.52	25.25

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF225	SUPFAM:SSF53720
EnsemblPlantsGene:TraesCS6D01G272400	EnsemblPlants:TraesCS6D01G272400.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:-:381187925..381191081

Molecular Weight (calculated)

58739.5 Da

IEP (calculated)

7.470

GRAVY (calculated)

-0.057

Length

545 amino acids

Sequence
(BLAST)

001: MVARRAASSF LSRRGLLLPR PPADSLLRAD SARRSLPGAV YRFSTAPAAT ADEEPIKPPV EVKYTQLLIN GNFVDAASGR TFPTVDPRTG EVIARVAEGD
101: AEDIDRAVAA ARRAFDEGPW PRMTAYERCR VLLRFADLME RHNDEIAALE SWDGGKPLEQ SAGGEVPMAA RCMRYYAGWA DKIHGMVVPA DGPHHVQVLR
201: EPIGVAGQII PWNFPLLMFA WKVGPALACG NAVVLKTAEQ TPLSALYVAS LLHEAGLPDG VLNVVPGFGP TAGAALCSHM GVDKLAFTGS TGTGKIILEL
301: AARSNLKPVT LELGGKSPFI VMDDADVDQA VELAHRALFF NQGQCCCAGS RTFVHESVYD EFVEKSKARA QRRVVGDPFK KGVEQGPQID GQQFKKILGY
401: VKSGVDSGAT LVTGGERVGS RGFYIQPTVF ADVEDEMKIA QEEIFGPIQS ILKFREVGEV VRRANATQYG LAAGVFTRSL DTANAVARAL RVGTVWVNCY
501: DVFDAAIPFG GYKMSGVGRE KGAYSLGNYL QTKAVVAPLR DPAWL

Best Arabidopsis Sequence Match ( AT1G23800.1 )
(BLAST)

001: MASRRVSSLL SRSFMSSSRS IFSLRGMNRG AQRYSNLAAA VENTITPPVK VEHTQLLIGG RFVDAVSGKT FPTLDPRNGE VIAQVSEGDA EDVNRAVAAA
101: RKAFDEGPWP KMTAYERSKI LFRFADLIEK HNDEIAALET WDNGKPYEQS AQIEVPMLAR VFRYYAGWAD KIHGMTMPGD GPHHVQTLHE PIGVAGQIIP
201: WNFPLLMLSW KLGPALACGN TVVLKTAEQT PLSALLVGKL LHEAGLPDGV VNIVSGFGAT AGAAIASHMD VDKVAFTGST DVGKIILELA SKSNLKAVTL
301: ELGGKSPFIV CEDADVDQAV ELAHFALFFN QGQCCCAGSR TFVHERVYDE FVEKAKARAL KRNVGDPFKS GIEQGPQVDS EQFNKILKYI KHGVEAGATL
401: QAGGDRLGSK GYYIQPTVFS DVKDDMLIAT DEIFGPVQTI LKFKDLDEVI ARANNSRYGL AAGVFTQNLD TAHRLMRALR VGTVWINCFD VLDASIPFGG
501: YKMSGIGREK GIYSLNNYLQ VKAVVTSLKN PAWL

Arabidopsis Description

ALDH2B7Aldehyde dehydrogenase family 2 member B7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8S528]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.