CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

nucleus: 21132161
mitochondrion: 27780359

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54419	Soybean	nucleus	88.91	74.26
VIT_17s0000g08070.t01	Wine grape	mitochondrion	86.25	72.3
KRH45689	Soybean	nucleus	85.14	71.64
KRG99327	Soybean	mitochondrion	84.7	71.27
PGSC0003DMT400062930	Potato	cytosol	84.04	70.84
KRH74615	Soybean	mitochondrion	83.59	70.07
Solyc03g114150.2.1	Tomato	plastid	82.71	69.72
KRH69545	Soybean	mitochondrion	82.93	69.39
GSMUA_Achr5P05290_001	Banana	mitochondrion	81.37	67.71
GSMUA_Achr3P06170_001	Banana	mitochondrion	79.6	67.48
KRH20324	Soybean	mitochondrion	80.49	67.22
KXG19772	Sorghum	mitochondrion	82.26	66.73
HORVU6Hr1G072830.2	Barley	peroxisome	75.83	66.67
Os06t0270900-01	Rice	mitochondrion	81.15	66.67
AT1G23800.1	Thale cress	mitochondrion	78.71	66.48
KRH63505	Soybean	mitochondrion	65.41	66.44
TraesCS7A01G210100.1	Wheat	mitochondrion	80.04	65.76
TraesCS7B01G116800.1	Wheat	mitochondrion	80.27	65.58
TraesCS7D01G211900.1	Wheat	mitochondrion	79.82	65.57
KRG93347	Soybean	peroxisome	76.72	65.53
HORVU7Hr1G042880.1	Barley	mitochondrion	79.6	65.39
CDY57318	Canola	mitochondrion	77.83	65.36
CDX91724	Canola	mitochondrion	77.83	65.36
Bra024619.1-P	Field mustard	mitochondrion	77.61	65.3
Bra016330.1-P	Field mustard	mitochondrion	77.38	64.99
CDY47634	Canola	mitochondrion	77.83	64.52
CDY61548	Canola	cytosol, peroxisome	77.61	63.06
TraesCS6D01G272400.1	Wheat	mitochondrion	75.61	62.57
KXG30827	Sorghum	mitochondrion, plastid	76.27	62.43
Os02t0730000-02	Rice	mitochondrion	76.5	62.39
Zm00001d045706_P001	Maize	mitochondrion	78.94	60.75
Zm00001d051754_P003	Maize	cytosol	76.72	59.76
TraesCS6B01G321400.1	Wheat	mitochondrion	56.54	59.44
KRH48414	Soybean	peroxisome	25.28	57.58
KRH41586	Soybean	nucleus	56.98	51.3
KRH60293	Soybean	nucleus	56.98	51.2
KRH48412	Soybean	nucleus	56.1	50.5
KRH39268	Soybean	nucleus	56.1	50.5
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	56.32	49.13
KRH41589	Soybean	nucleus	54.99	49.11
KRH48410	Soybean	cytosol	52.99	47.7
KRH39270	Soybean	cytosol	52.55	47.31
KRH60295	Soybean	mitochondrion, plastid	55.88	46.84
KRH54453	Soybean	endoplasmic reticulum	41.02	36.78
KRH57015	Soybean	endoplasmic reticulum	39.47	36.48
KRH43670	Soybean	mitochondrion	40.13	33.71
KRH13776	Soybean	mitochondrion	39.69	33.33
KRH21731	Soybean	cytosol	19.07	27.56
KRH10621	Soybean	cytosol	30.82	26.89
KRH72280	Soybean	cytosol, nucleus	29.49	26.76
KRH03077	Soybean	cytosol, nucleus	29.27	26.56
KRH05288	Soybean	cytosol	27.94	25.4
KRH49851	Soybean	mitochondrion	29.93	25.14
KRH42067	Soybean	mitochondrion	29.71	24.77
KRH12550	Soybean	mitochondrion	26.83	23.82
KRH37502	Soybean	endoplasmic reticulum	26.83	23.77
KRH50740	Soybean	endoplasmic reticulum	30.16	22.78
KRH02344	Soybean	endoplasmic reticulum	29.93	22.65
KRH11951	Soybean	endoplasmic reticulum	29.71	22.45
KRH36977	Soybean	endoplasmic reticulum, extracellular, vacuole	28.6	22.09
KRH45519	Soybean	nucleus	29.05	13.06

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	EMBL:ACUP02010343	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlantsGene:GLYMA_17G091000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004029	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0055114	UniProt:I1MTI7	InterPro:IPR016162	InterPro:IPR016163	EnsemblPlants:KRH03318	ProteinID:KRH03318
ProteinID:KRH03318.1	PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF225
SUPFAM:SSF53720	UniParc:UPI00023D5A37	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:7090659..7095786

Molecular Weight (calculated)

49698.1 Da

IEP (calculated)

8.271

GRAVY (calculated)

-0.031

Length

451 amino acids

Sequence
(BLAST)

001: MLLKGMLKIS TRAVSAARKA FDEGPWPKMT AYERSRILLR FADLVEKHSD ELAALETWNN GKTYEQAAKT ELPMFVRLFH YYAGWADKIH GLTVPADGDY
101: HVQTLHEPIG VAGQIIPWNF PLVMFAWKVG PALACGNTIV LKTAEQTPLT ALFVAKLFHE AGLPDGVLNV VSGYGPTAGA ALASHMDVDK LAFTGSTDTG
201: KVVLELAARS NLKPVTLELG GKSPFIICED ADVDKAVELA HFALFFNQGQ CCCAGSRTFV HERVYDEFLE KSKKRALRRV VGDPFKKGVE QGPQIDVEQF
301: EKVLRYIRSG IESHATLECG GDRLGSKGFF VQPTVFSNVQ DDMLIAQDEI FGPVQSILKF KDIDEVIRRA NKTRYGLAAG VFTKNVSTAN TLMRALRAGT
401: VWINCFDVFD AAIPFGGYKM SGIGREKGIY SLHNYLQVKA VVSPVKNPAW L

Best Arabidopsis Sequence Match ( AT1G23800.1 )
(BLAST)

001: MASRRVSSLL SRSFMSSSRS IFSLRGMNRG AQRYSNLAAA VENTITPPVK VEHTQLLIGG RFVDAVSGKT FPTLDPRNGE VIAQVSEGDA EDVNRAVAAA
101: RKAFDEGPWP KMTAYERSKI LFRFADLIEK HNDEIAALET WDNGKPYEQS AQIEVPMLAR VFRYYAGWAD KIHGMTMPGD GPHHVQTLHE PIGVAGQIIP
201: WNFPLLMLSW KLGPALACGN TVVLKTAEQT PLSALLVGKL LHEAGLPDGV VNIVSGFGAT AGAAIASHMD VDKVAFTGST DVGKIILELA SKSNLKAVTL
301: ELGGKSPFIV CEDADVDQAV ELAHFALFFN QGQCCCAGSR TFVHERVYDE FVEKAKARAL KRNVGDPFKS GIEQGPQVDS EQFNKILKYI KHGVEAGATL
401: QAGGDRLGSK GYYIQPTVFS DVKDDMLIAT DEIFGPVQTI LKFKDLDEVI ARANNSRYGL AAGVFTQNLD TAHRLMRALR VGTVWINCFD VLDASIPFGG
501: YKMSGIGREK GIYSLNNYLQ VKAVVTSLKN PAWL

Arabidopsis Description

ALDH2B7Aldehyde dehydrogenase family 2 member B7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8S528]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.