CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G107520.1	Barley	cytosol, peroxisome	62.18	60.81
KRH10621	Soybean	cytosol	80.77	48.74
KRH49851	Soybean	mitochondrion	77.24	44.88
KRH42067	Soybean	mitochondrion	76.28	43.99
VIT_03s0132g00200.t01	Wine grape	mitochondrion	72.76	42.12
Bra037214.1-P	Field mustard	mitochondrion	69.87	41.37
CDX81452	Canola	mitochondrion	69.87	41.37
CDY37216	Canola	mitochondrion	69.87	41.37
PGSC0003DMT400027691	Potato	mitochondrion	70.19	40.78
GSMUA_Achr4P22360_001	Banana	mitochondrion	69.87	40.52
Os07t0188800-01	Rice	mitochondrion	65.38	38.2
Zm00001d019054_P001	Maize	mitochondrion	65.38	37.99
TraesCS2A01G477900.1	Wheat	mitochondrion	64.74	37.9
TraesCS2B01G501200.1	Wheat	golgi, mitochondrion, unclear	64.74	37.83
EER95994	Sorghum	mitochondrion	65.38	37.78
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	64.42	37.64
AT2G14170.1	Thale cress	mitochondrion	67.95	34.93
HORVU2Hr1G107550.1	Barley	plasma membrane	64.1	34.48
KRH03318	Soybean	mitochondrion	27.56	19.07
KRH39268	Soybean	nucleus	30.45	18.96
KRH45519	Soybean	nucleus	60.58	18.84
KRH48412	Soybean	nucleus	30.13	18.76
KRH48414	Soybean	peroxisome	11.86	18.69
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	30.77	18.57
KRH41589	Soybean	nucleus	29.49	18.22
KRH41586	Soybean	nucleus	29.17	18.16
KRH48410	Soybean	cytosol	29.17	18.16
KRH60293	Soybean	nucleus	28.85	17.93
KRH39270	Soybean	cytosol	28.21	17.56
KRH60295	Soybean	mitochondrion, plastid	29.81	17.29
KRH20324	Soybean	mitochondrion	29.81	17.22
KRH54453	Soybean	endoplasmic reticulum	27.56	17.1
KRG99327	Soybean	mitochondrion	28.85	16.79
KRH69545	Soybean	mitochondrion	28.85	16.7
KRG93347	Soybean	peroxisome	28.21	16.67
KRH45689	Soybean	nucleus	28.53	16.6
KRH74615	Soybean	mitochondrion	28.53	16.54
KRH57015	Soybean	endoplasmic reticulum	25.0	15.98
KRH54419	Soybean	nucleus	27.56	15.93
KRH13776	Soybean	mitochondrion	25.96	15.08
KRH43670	Soybean	mitochondrion	25.32	14.71
KRH72280	Soybean	cytosol, nucleus	23.4	14.69
KRH03077	Soybean	cytosol, nucleus	23.4	14.69
KRH12550	Soybean	mitochondrion	23.4	14.37
KRH37502	Soybean	endoplasmic reticulum	23.4	14.34
KRH05288	Soybean	cytosol	22.76	14.31
KRH63505	Soybean	mitochondrion	16.99	11.94
KRH11951	Soybean	endoplasmic reticulum	22.44	11.73
KRH02344	Soybean	endoplasmic reticulum	22.12	11.58
KRH36977	Soybean	endoplasmic reticulum, extracellular, vacuole	21.47	11.47
KRH50740	Soybean	endoplasmic reticulum	21.79	11.39

Protein Annotations

KEGG:00280+1.2.1.27	KEGG:00640+1.2.1.27	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.7.6.3	EMBL:ACUP02008363
InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlantsGene:GLYMA_13G255700
GO:GO:0003674	GO:GO:0003824	GO:GO:0004491	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016620	GO:GO:0055114	UniProt:I1M2L7	InterPro:IPR016162	InterPro:IPR016163	EnsemblPlants:KRH21731
ProteinID:KRH21731	ProteinID:KRH21731.1	InterPro:MeMal-semiAld_DH	PFAM:PF00171	ScanProsite:PS00070	PANTHER:PTHR43866
PANTHER:PTHR43866:SF3	MetaCyc:PWY-5642	MetaCyc:PWY-6373	SUPFAM:SSF53720	UniParc:UPI00023CEEF3	:

Description

hypothetical protein

Coordinates

chr13:+:36133004..36135970

Molecular Weight (calculated)

33635.6 Da

IEP (calculated)

6.875

GRAVY (calculated)

0.138

Length

312 amino acids

Sequence
(BLAST)

001: MAERIGYHNF GIFPGASVML AELAMEAGLP EGVLNIVHGT HELLGLFDDD DIKAVSFVGS NVAGMHIYAR AAAKGKRVQA NMGAKNHVVV MPDANVNALV
101: AAGFGAAGQR CMALSTVVFV GGSKLWESKL LEHAKALKVN VGTKPDADLG PVISKQAKER IHKLIQSGVE SGARLVLDGR NIVVLGYESG NFIDPTILSD
201: VTANMECYKE EIFGPVLLME ADSLEEAINI INENKYGNGA SIFTTSSVAA RKFQAEIEAG QVGINVSSSF ALFLIYWQQG LICWRSQFLR YSKAGVNFYI
301: LPQKPFYSNK SC

Best Arabidopsis Sequence Match ( AT2G14170.1 )
(BLAST)

001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ

Arabidopsis Description

ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.