Factsheet for HORVU2Hr1G107550.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	plastid
YLoc:	plastid

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G107520.1	Barley	cytosol, peroxisome	55.0	100.0
TraesCS2A01G477900.1	Wheat	mitochondrion	89.48	97.37
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	89.48	97.19
TraesCS2B01G501200.1	Wheat	golgi, mitochondrion, unclear	89.31	97.0
Os07t0188800-01	Rice	mitochondrion	85.17	92.51
EER95994	Sorghum	mitochondrion	85.0	91.3
Zm00001d019054_P001	Maize	mitochondrion	83.45	90.13
GSMUA_Achr4P22360_001	Banana	mitochondrion	72.76	78.44
VIT_03s0132g00200.t01	Wine grape	mitochondrion	70.52	75.88
KRH42067	Soybean	mitochondrion	69.66	74.68
KRH49851	Soybean	mitochondrion	68.79	74.3
KRH10621	Soybean	cytosol	65.86	73.89
CDX81452	Canola	mitochondrion	66.72	73.43
Bra037214.1-P	Field mustard	mitochondrion	66.55	73.24
PGSC0003DMT400027691	Potato	mitochondrion	67.76	73.18
CDY37216	Canola	mitochondrion	66.38	73.06
KRH21731	Soybean	cytosol	34.48	64.1
AT2G14170.1	Thale cress	mitochondrion	67.07	64.09
VIT_03s0132g00230.t01	Wine grape	cytosol	48.79	48.96
KRH45519	Soybean	nucleus	58.1	33.6
HORVU6Hr1G072830.2	Barley	peroxisome	25.69	29.04
HORVU1Hr1G068020.1	Barley	cytosol	23.97	27.86
HORVU0Hr1G031700.1	Barley	cytosol	23.97	27.86
VIT_00s0218g00070.t01	Wine grape	cytosol	66.21	27.83
HORVU0Hr1G028680.4	Barley	peroxisome	19.83	27.32
HORVU7Hr1G042880.1	Barley	mitochondrion	25.0	26.41
HORVU7Hr1G085120.2	Barley	mitochondrion	24.83	25.81
HORVU3Hr1G092680.2	Barley	mitochondrion, peroxisome, plastid	23.28	25.71
HORVU2Hr1G080970.1	Barley	peroxisome	22.24	25.49
HORVU2Hr1G036110.7	Barley	cytosol	21.38	25.0
HORVU6Hr1G087460.1	Barley	plastid	22.41	24.71
HORVU6Hr1G031480.15	Barley	mitochondrion	23.62	24.68
HORVU5Hr1G062090.1	Barley	plastid	21.21	21.5
HORVU2Hr1G016040.10	Barley	mitochondrion	20.52	20.2

Protein Annotations

KEGG:00280+1.2.1.27	KEGG:00640+1.2.1.27	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.7.6.3	UniProt:A0A287JCX0
InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004491	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G107550	EnsemblPlants:HORVU2Hr1G107550.1	InterPro:IPR016162	InterPro:IPR016163	InterPro:MeMal-semiAld_DH
PFAM:PF00171	ScanProsite:PS00070	PANTHER:PTHR43866	PANTHER:PTHR43866:SF5	SUPFAM:SSF53720	TIGRFAMs:TIGR01722
UniParc:UPI000B47FA2B	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:712173525..712180295

Molecular Weight (calculated)

62107.8 Da

IEP (calculated)

7.973

GRAVY (calculated)

-0.031

Length

580 amino acids

Sequence
(BLAST)

001: QLHSPPVATP LSPPPLPSSG PPLLVTAPLH TPVPRRNHRR RRPTMLRAVL LRSASGLRRS PMAAPLSTAA ASWLAEGASS SPPRVRLLIG GDFVESKATE
101: HVDVTNPATQ EVVSRIPLTT ADEFRAAVDA ARTAFPGWRS TPVTARQRIM FKYQELIRAN MDKLAENITT EQGKTLKDAW GDVFRGLEVV EHACGMGSLQ
201: MGEYLSNVSH GIDTFSIREP LGVCAGICPF NFPAMIPLWM FPIAVTCGNT FVLKPSEKDP GAAMMLAELA MEAGLPKGVL NIVHGTHDVV NNICDEEAIK
301: AVSFVGSNTA GMHIYSRASA SGKRVQCNMG AKNHAIILPD ADRDATLNAL IAAGFGAAGQ RCMALSTAVF VGGSEPWEDE LVKRASSLVV NSGTANDADL
401: GPVISRQAKD RICKLVQSGV DSGARIVLDG REIVVPQFED GNFVGPTVLA DVKSDMECYK EEIFGPVLLL MKAESLDDAI QIVNRNKYGN GASIFTTSGV
501: SARKFQTDIE AGQVGINVPI PVPLPFFSFT GSKASFAGDL NFYGKAGVQF FTQIKTITQQ WKEPSAQRVS LSMPTSAQVK

Best Arabidopsis Sequence Match ( AT2G14170.1 )
(BLAST)

001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ

Arabidopsis Description

ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.