Factsheet for VIT_03s0132g00200.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10621	Soybean	cytosol	80.52	83.95
PGSC0003DMT400027691	Potato	mitochondrion	83.12	83.43
KRH42067	Soybean	mitochondrion	83.67	83.36
KRH49851	Soybean	mitochondrion	82.93	83.24
CDX81452	Canola	mitochondrion	81.26	83.11
Bra037214.1-P	Field mustard	mitochondrion	80.7	82.54
CDY37216	Canola	mitochondrion	80.7	82.54
GSMUA_Achr4P22360_001	Banana	mitochondrion	81.63	81.78
HORVU2Hr1G107520.1	Barley	cytosol, peroxisome	47.12	79.62
Os07t0188800-01	Rice	mitochondrion	76.99	77.72
TraesCS2A01G477900.1	Wheat	mitochondrion	76.81	77.67
TraesCS2B01G501200.1	Wheat	golgi, mitochondrion, unclear	76.62	77.34
EER95994	Sorghum	mitochondrion	77.18	77.04
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	76.25	76.97
Zm00001d019054_P001	Maize	mitochondrion	76.44	76.72
KRH21731	Soybean	cytosol	42.12	72.76
AT2G14170.1	Thale cress	mitochondrion	81.26	72.16
HORVU2Hr1G107550.1	Barley	plasma membrane	75.88	70.52
VIT_03s0132g00230.t01	Wine grape	cytosol	59.18	55.19
VIT_00s0218g00070.t01	Wine grape	cytosol	78.48	30.65
VIT_17s0000g07650.t01	Wine grape	peroxisome	27.09	29.03
VIT_17s0000g07660.t01	Wine grape	cytosol	13.36	28.92
VIT_19s0085g00860.t01	Wine grape	cytosol, mitochondrion, peroxisome	25.42	28.54
VIT_01s0137g00080.t01	Wine grape	cytosol	20.96	28.54
VIT_17s0000g08070.t01	Wine grape	mitochondrion	28.2	28.25
VIT_14s0066g01550.t01	Wine grape	mitochondrion	28.01	28.22
VIT_01s0026g00220.t01	Wine grape	mitochondrion	28.01	27.71
VIT_19s0085g00870.t01	Wine grape	cytosol	24.49	26.77
VIT_14s0066g02410.t01	Wine grape	cytosol, peroxisome, plastid	24.49	26.51
VIT_04s0008g05810.t01	Wine grape	cytosol	24.12	26.21
VIT_11s0037g00070.t01	Wine grape	cytosol	23.93	26.01
VIT_19s0085g00880.t01	Wine grape	plastid	25.42	25.85
VIT_11s0016g00900.t01	Wine grape	cytosol	21.52	22.83
VIT_09s0002g01010.t01	Wine grape	cytosol	18.92	22.57
VIT_01s0026g00210.t01	Wine grape	cytosol	24.12	22.15
VIT_05s0077g01060.t01	Wine grape	vacuole	20.22	18.38

Protein Annotations

KEGG:00280+1.2.1.27	KEGG:00640+1.2.1.27	EntrezGene:100266351	wikigene:100266351	Gene3D:3.40.309.10	Gene3D:3.40.605.10
MapMan:4.2.7.6.3	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom
ProteinID:CBI29381	ProteinID:CBI29381.3	UniProt:D7TFV8	EMBL:FN595773	GO:GO:0003674	GO:GO:0003824
GO:GO:0004491	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114
InterPro:IPR016162	InterPro:IPR016163	EntrezGene:LOC100266351	wikigene:LOC100266351	InterPro:MeMal-semiAld_DH	PFAM:PF00171
ScanProsite:PS00070	PANTHER:PTHR43866	PANTHER:PTHR43866:SF5	SUPFAM:SSF53720	TIGR:TC65612	TIGRFAMs:TIGR01722
UniParc:UPI0001982DCB	ArrayExpress:VIT_03s0132g00200	EnsemblPlantsGene:VIT_03s0132g00200	EnsemblPlants:VIT_03s0132g00200.t01	unigene:Vvi.13745	RefSeq:XP_002266390
RefSeq:XP_002266390.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:-:11598525..11619009

Molecular Weight (calculated)

58063.7 Da

IEP (calculated)

7.693

GRAVY (calculated)

-0.051

Length

539 amino acids

Sequence
(BLAST)

001: MLRFSLQRVR NFKSLRPELF ALGNSRFSTA TEPSSKQRNP PRVPNLIGGS FVDSQSSEFI DVINPATQQV VSQIPLTSNE EFKAAVSAAK QAFPAWRNTP
101: VTTRQRIMFK LQQLIRRDID KLAMNITTEQ GKTLKDAHGD VFRGLEVVEH ACGMATLQMG EFVPNVSSGI DTYSIREPLG VCAGICPFNF PAMIPLWMFP
201: IAVTCGNTFV LKPSEKDPGA SLMLAELAME AGLPDGVLNI VHGTRNIVNA ICDDEDIRAV SFVGSNTAGM HIYSRASAKG KRVQSNMGAK NHAIVLPDAS
301: LDATLNALVA AGFGAAGQRC MALSTVVFVG DSKSWEDKLL ERAKALKVNS GTEPDADLGP VISKEAKERI CKLIQNGVDS GARLVLDGRN IVVPGYEHGN
401: FIGPTILSDV TADMECYKEE IFGPVLLCIQ ADSLDEAINI VNRNKYGNGA SIFTSSGVDA RKFQTEIEAG QVGINVPIPV PLPFFSFTGS KASFAGDLNF
501: YGKAGVQFYT QIKTVTQQWK GLASGSGVSL AMPTSQKSQ

Best Arabidopsis Sequence Match ( AT2G14170.1 )
(BLAST)

001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ

Arabidopsis Description

ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.