Factsheet for VIT_17s0000g07660.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g07650.t01	Wine grape	peroxisome	87.55	43.34
CDX85862	Canola	cytosol, peroxisome, plastid	80.32	39.84
Bra003781.1-P	Field mustard	plastid	79.52	39.52
CDX68159	Canola	plastid	79.52	39.52
AT1G74920.1	Thale cress	cytosol, peroxisome, plastid	79.12	39.32
KRH54453	Soybean	endoplasmic reticulum	76.31	37.77
KRH57015	Soybean	endoplasmic reticulum	73.9	37.7
GSMUA_Achr9P16120_001	Banana	peroxisome	76.31	37.62
Zm00001d032257_P001	Maize	extracellular	75.1	36.96
EES13852	Sorghum	peroxisome	74.3	36.63
VIT_14s0066g02410.t01	Wine grape	cytosol, peroxisome, plastid	73.09	36.55
KXG26485	Sorghum	peroxisome	73.49	36.17
Zm00001d050339_P001	Maize	extracellular	73.09	36.04
Os04t0464200-01	Rice	peroxisome	73.09	36.04
Zm00001d025626_P002	Maize	mitochondrion	73.09	35.97
Os08t0424500-01	Rice	plastid	71.89	35.59
TraesCS6A01G371100.1	Wheat	golgi, nucleus, unclear	71.49	35.46
PGSC0003DMT400063205	Potato	cytosol, peroxisome, plastid	71.89	35.45
TraesCS6D01G355000.2	Wheat	golgi	71.49	35.39
TraesCS6B01G408100.1	Wheat	mitochondrion	71.08	35.19
Solyc03g113800.2.1	Tomato	plastid	71.08	35.05
TraesCS2D01G326900.1	Wheat	golgi, unclear	71.08	34.98
PGSC0003DMT400083025	Potato	cytosol	70.68	34.92
HORVU2Hr1G080970.1	Barley	peroxisome	70.28	34.59
Solyc06g071290.2.1	Tomato	plastid	69.08	34.13
HORVU6Hr1G087460.1	Barley	plastid	71.08	33.65
TraesCS2A01G336000.1	Wheat	peroxisome	70.68	32.35
VIT_01s0137g00080.t01	Wine grape	cytosol	38.15	23.99
VIT_19s0085g00860.t01	Wine grape	cytosol, mitochondrion, peroxisome	36.55	18.96
VIT_19s0085g00880.t01	Wine grape	plastid	38.15	17.92
VIT_01s0026g00220.t01	Wine grape	mitochondrion	38.55	17.61
VIT_17s0000g08070.t01	Wine grape	mitochondrion	37.75	17.47
VIT_14s0066g01550.t01	Wine grape	mitochondrion	36.95	17.2
VIT_19s0085g00870.t01	Wine grape	cytosol	31.73	16.02
VIT_01s0026g00210.t01	Wine grape	cytosol	34.94	14.82
VIT_11s0016g00900.t01	Wine grape	cytosol	29.32	14.37
TraesCS2B01G346000.1	Wheat	mitochondrion	17.27	13.83
VIT_11s0037g00070.t01	Wine grape	cytosol	27.31	13.71
VIT_04s0008g05810.t01	Wine grape	cytosol	26.91	13.51
VIT_03s0132g00200.t01	Wine grape	mitochondrion	28.92	13.36
VIT_05s0077g01060.t01	Wine grape	vacuole	31.73	13.32
VIT_09s0002g01010.t01	Wine grape	cytosol	20.88	11.5
VIT_03s0132g00230.t01	Wine grape	cytosol	13.25	5.71
VIT_00s0218g00070.t01	Wine grape	cytosol	25.7	4.64

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:35.1	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	ProteinID:CBI15092	ProteinID:CBI15092.3	UniProt:D7SHY2	EMBL:FN594950
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	PFAM:PF00171	ScanProsite:PS00070	PANTHER:PTHR43860
PANTHER:PTHR43860:SF3	SUPFAM:SSF53720	UniParc:UPI0001BE0AB6	ArrayExpress:VIT_17s0000g07660	EnsemblPlantsGene:VIT_17s0000g07660	EnsemblPlants:VIT_17s0000g07660.t01

Description

No Description!

Coordinates

chr17:-:8622032..8628980

Molecular Weight (calculated)

27207.2 Da

IEP (calculated)

4.439

GRAVY (calculated)

-0.092

Length

249 amino acids

Sequence
(BLAST)

001: MTAAAQLVKP VSLELGGKSS ILVFEDVDLD KAAEWTAFGC FWTNGQICSA TSRLLVQEST AAEFLDKLVK WTKNIKISDP LEEGCKLGPV VSRGQYEKLS
101: EFISTATSED GTVLCGGGCP QHLKRGFFIE PTIISDVTTS MQIWREEVFG PVLCVKTLST EDEAIELAND SSYALAGAVI SDDLERCDRV SKALNAGIVW
201: VNCSQPCFYQ APWGGNKRSG FGRELGPWGL DNYLNVKQVT QYISSEPWG

Best Arabidopsis Sequence Match ( AT3G48170.1 )
(BLAST)

001: MAITVPRRQL FIGGQWTEPV LRKTLPVVNP ATEDIIGYIP AATSEDVELA VEAARKAFTR NNGKDWARAT GAVRAKYLRA IAAKVIERKS ELANLEAIDC
101: GKPLDEAAWD MDDVAGCFEY YADLAEGLDA KQKTPLSLPM DTFKGYILKE PIGVVGMITP WNYPLLMAVW KVAPSLAAGC TAILKPSELA SLTCLELADI
201: CREVGLPPGV LNILTGLGTE AGAPLASHPH VDKIVFTGST TTGSSIMTSA AKLVKPVSLE LGGKSPIIVF DDVDIDKAVE WTMFGCFWTN GQICSATSRL
301: LVHERIADEF LDKLVKWTKN IKISDPFEEG CRLGPVVSKG QYERVLKFVS NARNEGATVL CGGVRPEHLK KGYFVEPAIV SNVTTSMEIW REEVFGPALC
401: VKTFSTEDEA IQLANDSQYG LAGAVLSNDL ERCDRVSKAF QAGIVWVNCS QPCFCQAPWG GTKRSGFGRE LGEWGLENYL SVKQVTQYIS DEPWGWYKPP
501: SKL

Arabidopsis Description

ALDH10A9Betaine aldehyde dehydrogenase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9STS1]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.