Factsheet for Zm00001d050339_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 1
peroxisome 4
plastid 2

Predictors

GFP

MS/MS

Papers

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13852	Sorghum	peroxisome	98.61	98.61
Zm00001d032257_P001	Maize	extracellular	97.43	97.23
Os08t0424500-01	Rice	plastid	89.31	89.66
TraesCS6A01G371100.1	Wheat	golgi, nucleus, unclear	86.93	87.45
TraesCS6B01G408100.1	Wheat	mitochondrion	86.73	87.08
TraesCS6D01G355000.2	Wheat	golgi	86.53	86.88
HORVU6Hr1G087460.1	Barley	plastid	86.73	83.27
GSMUA_Achr9P16120_001	Banana	peroxisome	79.8	79.8
VIT_17s0000g07650.t01	Wine grape	peroxisome	76.44	76.74
Zm00001d025626_P002	Maize	mitochondrion	76.24	76.09
AT1G74920.1	Thale cress	cytosol, peroxisome, plastid	74.85	75.45
KRH57015	Soybean	endoplasmic reticulum	72.48	75.0
CDX85862	Canola	cytosol, peroxisome, plastid	74.06	74.5
Bra003781.1-P	Field mustard	plastid	73.86	74.45
CDX68159	Canola	plastid	73.86	74.45
VIT_17s0000g07660.t01	Wine grape	cytosol	36.04	73.09
KRH54453	Soybean	endoplasmic reticulum	72.28	72.56
VIT_14s0066g02410.t01	Wine grape	cytosol, peroxisome, plastid	68.71	69.68
PGSC0003DMT400063205	Potato	cytosol, peroxisome, plastid	68.51	68.51
Solyc03g113800.2.1	Tomato	plastid	68.12	68.12
PGSC0003DMT400083025	Potato	cytosol	66.53	66.67
Solyc06g071290.2.1	Tomato	plastid	65.54	65.67
Zm00001d036933_P001	Maize	cytosol	41.98	39.77
Zm00001d044340_P001	Maize	cytosol	40.2	39.73
Zm00001d011259_P001	Maize	cytosol	39.8	39.26
Zm00001d053776_P015	Maize	mitochondrion	36.44	34.91
Zm00001d051754_P003	Maize	cytosol	39.8	34.72
Zm00001d045706_P001	Maize	mitochondrion	39.01	33.62
Zm00001d044339_P003	Maize	cytosol, peroxisome, plasma membrane	37.23	32.25
Zm00001d003983_P002	Maize	cytosol	13.27	31.16
Zm00001d050428_P003	Maize	cytosol	28.71	28.66
Zm00001d005818_P001	Maize	cytosol	27.13	26.81
Zm00001d022554_P003	Maize	endoplasmic reticulum	29.7	25.04
Zm00001d019054_P001	Maize	mitochondrion	25.74	24.21
Zm00001d050495_P001	Maize	plastid	12.28	20.67
Zm00001d008814_P001	Maize	cytosol	5.15	11.71

Protein Annotations

EntrezGene:100302679	Gene3D:3.40.309.10	Gene3D:3.40.605.10	PDB:4I8P	MapMan:9.4.1.2	ProteinID:AQK52374.1
InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom
EMBL:BT064965	UniProt:C0P9J6	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0019145	GO:GO:0033737
GO:GO:0055114	EMBL:GQ184593	InterPro:IPR016162	InterPro:IPR016163	PFAM:PF00171	ScanProsite:PS00070
ScanProsite:PS00687	PANTHER:PTHR43860	PANTHER:PTHR43860:SF3	SUPFAM:SSF53720	UniParc:UPI000194B10B	EnsemblPlantsGene:Zm00001d050339
EnsemblPlants:Zm00001d050339_P001	EnsemblPlants:Zm00001d050339_T001	SEG:seg	:	:	:

Description

Betaine aldehyde dehydrogenase 2 mitochondrial

Coordinates

chr4:+:82300133..82306026

Molecular Weight (calculated)

54915.9 Da

IEP (calculated)

5.098

GRAVY (calculated)

-0.117

Length

505 amino acids

Sequence
(BLAST)

001: MASPAMVPLR QLFVDGEWRP PAQGRRLPVV NPTTEAHIGE IPAGTAEDVD AAVAAARAAL KRNRGRDWAR APGAVRAKYL RAIAAKVIER KPELAKLEAL
101: DCGKPYDEAA WDMDDVAGCF EYFADQAEAL DKRQNSPVSL PMETFKCHLR REPIGVVGLI TPWNYPLLMA TWKIAPALAA GCTAVLKPSE LASVTCLELA
201: DICKEVGLPS GVLNIVTGLG PDAGAPLSAH PDVDKVAFTG SFETGKKIMA SAAPMVKPVT LELGGKSPIV VFDDVDIDKA VEWTLFGCFW TNGQICSATS
301: RLLIHTKIAK KFNERMVAWA KNIKVSDPLE EGCRLGPVVS EGQYEKIKKF ISNAKSQGAT ILTGGVRPAH LEKGFFIEPT IITDITTSME IWREEVFGPV
401: LCVKEFSTED EAIELANDTQ YGLAGAVISG DRERCQRLSE EIDAGCIWVN CSQPCFCQAP WGGNKRSGFG RELGEGGIDN YLSVKQVTEY ISDEPWGWYQ
501: SPSKL

Best Arabidopsis Sequence Match ( AT1G74920.1 )
(BLAST)

001: MAIPMPTRQL FIDGEWREPI LKKRIPIVNP ATEEVIGDIP AATTEDVDVA VNAARRALSR NKGKDWAKAP GAVRAKYLRA IAAKVNERKT DLAKLEALDC
101: GKPLDEAVWD MDDVAGCFEF YADLAEGLDA KQKAPVSLPM ESFKSYVLKQ PLGVVGLITP WNYPLLMAVW KVAPSLAAGC TAILKPSELA SVTCLELADI
201: CREVGLPPGV LNVLTGFGSE AGAPLASHPG VDKIAFTGSF ATGSKVMTAA AQLVKPVSME LGGKSPLIVF DDVDLDKAAE WALFGCFWTN GQICSATSRL
301: LVHESIASEF IEKLVKWSKN IKISDPMEEG CRLGPVVSKG QYEKILKFIS TAKSEGATIL HGGSRPEHLE KGFFIEPTII TDVTTSMQIW REEVFGPVLC
401: VKTFASEDEA IELANDSHYG LGAAVISNDT ERCDRISEAF EAGIVWINCS QPCFTQAPWG GVKRSGFGRE LGEWGLDNYL SVKQVTLYTS NDPWGWYKSP
501: N

Arabidopsis Description

ALDH10A8ALDH10A8 [Source:UniProtKB/TrEMBL;Acc:A0A178W4Y2]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.