Factsheet for Zm00001d053776_P015

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

extracellular: 20408568
mitochondrion: 27297264
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29578	Sorghum	mitochondrion	96.77	96.77
TraesCS6A01G155500.1	Wheat	mitochondrion	90.32	90.49
TraesCS6B01G183600.3	Wheat	mitochondrion	89.94	90.11
Os02t0173900-01	Rice	mitochondrion	52.56	89.35
TraesCS6D01G145400.4	Wheat	mitochondrion	90.13	87.8
GSMUA_Achr5P26830_001	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	56.36	83.19
HORVU6Hr1G031480.15	Barley	mitochondrion	86.15	81.8
AT1G79440.1	Thale cress	mitochondrion	73.43	73.3
PGSC0003DMT400044163	Potato	plastid	70.97	72.9
Bra035119.1-P	Field mustard	mitochondrion	72.49	72.08
VIT_19s0085g00880.t01	Wine grape	plastid	72.49	72.08
Solyc09g090700.1.1	Tomato	plastid	70.97	71.65
KRH43670	Soybean	mitochondrion	72.3	70.95
KRH13776	Soybean	mitochondrion	72.3	70.95
CDX87380	Canola	mitochondrion	72.49	69.2
CDX88542	Canola	mitochondrion	72.49	69.08
VIT_19s0085g00870.t01	Wine grape	cytosol	62.24	66.53
Zm00001d044340_P001	Maize	cytosol	38.33	39.53
Zm00001d011259_P001	Maize	cytosol	38.14	39.26
Zm00001d025626_P002	Maize	mitochondrion	36.24	37.75
Zm00001d050339_P001	Maize	extracellular	34.91	36.44
Zm00001d032257_P001	Maize	extracellular	34.91	36.36
Zm00001d036933_P001	Maize	cytosol	36.43	36.02
Zm00001d051754_P003	Maize	cytosol	37.0	33.68
Zm00001d044339_P003	Maize	cytosol, peroxisome, plasma membrane	37.0	33.45
Zm00001d045706_P001	Maize	mitochondrion	36.05	32.42
Zm00001d050428_P003	Maize	cytosol	27.51	28.66
Zm00001d003983_P002	Maize	cytosol	11.57	28.37
Zm00001d005818_P001	Maize	cytosol	26.38	27.2
Zm00001d019054_P001	Maize	mitochondrion	25.81	25.33
Zm00001d022554_P003	Maize	endoplasmic reticulum	27.32	24.04
Zm00001d050495_P001	Maize	plastid	11.57	20.33
Zm00001d008814_P001	Maize	cytosol	4.93	11.71

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.2.2.1	ProteinID:AQK60326.1	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_NAD(P)	InterPro:Aldehyde_DH_dom	UniProt:B4FYG3
EMBL:BT042151	GO:GO:0003674	GO:GO:0003824	GO:GO:0004030	GO:GO:0006081	GO:GO:0008150
GO:GO:0008152	GO:GO:0009013	GO:GO:0009056	GO:GO:0009450	GO:GO:0009987	GO:GO:0016491
GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	PFAM:PF00171	PIRSF:PIRSF036492
ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR43353	PANTHER:PTHR43353:SF5	SUPFAM:SSF53720	InterPro:Succ_semiAld_DH
TIGRFAMs:TIGR01780	UniParc:UPI00017B7C1E	EnsemblPlantsGene:Zm00001d053776	EnsemblPlants:Zm00001d053776_P015	EnsemblPlants:Zm00001d053776_T015	SEG:seg

Description

Succinate-semialdehyde dehydrogenase mitochondrial

Coordinates

chr4:-:240858718..240875478

Molecular Weight (calculated)

56116.0 Da

IEP (calculated)

7.769

GRAVY (calculated)

0.103

Length

527 amino acids

Sequence
(BLAST)

001: MAMAMMAMRR AVALGARHIP AAAASSFRVV SLRHMSADAG AAMEKIRAAG LLRTQGLIAG QWVDAYDGKT IEVQNPATGE VLANVSCMGS RETSDAIASA
101: HSTFYSWSKL TASERSKALR KWYDLIISHK EELALLMTLE QGKPMKEALG EVNYGASFIE YFAEEAKRIY GDIIPPTLSD RRLLVLKQPV GVVGAITPWN
201: FPLAMITRKV GPALACGCTV VVKPSEFTPL TALAAADLAL QAGIPAGALN VVMGNAAEIG DALLQSTQVR KITFTGSTAV GKKLMAGSAN TVKKVSLELG
301: GNAPCIVFDD ADIDVAVKGS LAAKFRNSGQ TCVCANRILV QEGIYEKFAK AFIQAVQSLK VGNGLEESTS QGPLINEAAV QKVEKFINDA TSKGANVMLG
401: GKRHSLGMSF YEPTVVGNVS NDMLLFREEV FGPVAPLIPF KTEEEAVHMA NDTNAGLAAY IFTKSIPRSW RVSESLEYGL VGVNEGIIST EVAPFGGVKQ
501: SGLGREGSKY GIDEYLELKY ICMGNLG

Best Arabidopsis Sequence Match ( AT1G79440.1 )
(BLAST)

001: MVIGAAARVA IGGCRKLISS HTSLLLVSSQ CRQMSMDAQS VSEKLRSSGL LRTQGLIGGK WLDSYDNKTI KVNNPATGEI IADVACMGTK ETNDAIASSY
101: EAFTSWSRLT AGERSKVLRR WYDLLIAHKE ELGQLITLEQ GKPLKEAIGE VAYGASFIEY YAEEAKRVYG DIIPPNLSDR RLLVLKQPVG VVGAITPWNF
201: PLAMITRKVG PALASGCTVV VKPSELTPLT ALAAAELALQ AGVPPGALNV VMGNAPEIGD ALLTSPQVRK ITFTGSTAVG KKLMAAAAPT VKKVSLELGG
301: NAPSIVFDDA DLDVAVKGTL AAKFRNSGQT CVCANRVLVQ DGIYDKFAEA FSEAVQKLEV GDGFRDGTTQ GPLINDAAVQ KVETFVQDAV SKGAKIIIGG
401: KRHSLGMTFY EPTVIRDVSD NMIMSKEEIF GPVAPLIRFK TEEDAIRIAN DTIAGLAAYI FTNSVQRSWR VFEALEYGLV GVNEGLISTE VAPFGGVKQS
501: GLGREGSKYG MDEYLEIKYV CLGDMNRH

Arabidopsis Description

ALDH5F1Succinate-semialdehyde dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAK4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.