CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053776_P015	Maize	mitochondrion	96.77	96.77
TraesCS6A01G155500.1	Wheat	mitochondrion	89.56	89.73
TraesCS6B01G183600.3	Wheat	mitochondrion	89.37	89.54
Os02t0173900-01	Rice	mitochondrion	51.8	88.06
TraesCS6D01G145400.4	Wheat	mitochondrion	89.56	87.25
GSMUA_Achr5P26830_001	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	56.55	83.47
HORVU6Hr1G031480.15	Barley	mitochondrion	85.58	81.26
AT1G79440.1	Thale cress	mitochondrion	74.19	74.05
PGSC0003DMT400044163	Potato	plastid	71.73	73.68
Bra035119.1-P	Field mustard	mitochondrion	73.24	72.83
VIT_19s0085g00880.t01	Wine grape	plastid	72.87	72.45
Solyc09g090700.1.1	Tomato	plastid	71.54	72.22
KRH13776	Soybean	mitochondrion	72.68	71.32
KRH43670	Soybean	mitochondrion	72.68	71.32
CDX87380	Canola	mitochondrion	73.24	69.93
CDX88542	Canola	mitochondrion	72.87	69.44
VIT_19s0085g00870.t01	Wine grape	cytosol	63.38	67.75
KXG32803	Sorghum	cytosol	38.9	40.92
EES00989	Sorghum	cytosol	38.71	40.48
KXG26485	Sorghum	peroxisome	36.81	38.34
EES13852	Sorghum	peroxisome	35.67	37.23
KXG20268	Sorghum	cytosol	36.43	36.85
KXG30827	Sorghum	mitochondrion, plastid	37.57	35.93
KXG19772	Sorghum	mitochondrion	36.62	34.71
EES13911	Sorghum	cytosol	27.32	28.92
EER98972	Sorghum	cytosol, peroxisome, plasma membrane	26.19	27.11
EER95994	Sorghum	mitochondrion	26.0	25.37
EER99950	Sorghum	endoplasmic reticulum	27.7	24.62

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.2.2.1	UniProt:A0A194YMX1	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009013	GO:GO:0009056	GO:GO:0009450	GO:GO:0009987
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	ProteinID:KXG29577.2
EnsemblPlants:KXG29578	ProteinID:KXG29578	ProteinID:KXG29578.1	PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687
PANTHER:PTHR43353	PANTHER:PTHR43353:SF5	EnsemblPlantsGene:SORBI_3004G058600	SUPFAM:SSF53720	InterPro:Succ_semiAld_DH	TIGRFAMs:TIGR01780
UniParc:UPI000220723C	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:4685051..4695810

Molecular Weight (calculated)

56021.1 Da

IEP (calculated)

8.251

GRAVY (calculated)

0.112

Length

527 amino acids

Sequence
(BLAST)

001: MAMAMMTLRR AVALGARHIP AVAAASSRIV PLRHMSAGAG AAVEKIRAAG LLRTQGLIAG KWVDAYDGKT IEVQNPATGE VLANVPCMGS RETSDAIASA
101: HSTFYSWSKL TAGERSKALR KWYDLIISHK EELALLMTLE QGKPMKEALG EVNYGASFIE YFAEEAKRIY GDIIPPTLSD RRLLVLKQPV GVVGAITPWN
201: FPLAMITRKV GPALACGCTV VVKPSEFTPL TALAAADLAL QAGIPAGALN VVMGNAPEIG DALLQSTQVR KITFTGSTAV GKKLMAGSAN TVKKVSLELG
301: GNAPCIVFDD ADIDVAVKGS LAAKFRNSGQ TCVCANRILV QEGIYEKFAT AFIKAVQSLK VGNGLEESTS QGPLINEAAV QKVEKFINDA TSKGANIMLG
401: GKRHSLGMTF YEPTVVGNVS NDMLLFREEV FGPVAPLIPF KTEEEAVHMA NDTNAGLAAY IFTKSIPRSW RVSESLEYGL VGVNEGIIST EVAPFGGVKQ
501: SGLGREGSKY GIDEYLELKY ICMGNLG

Best Arabidopsis Sequence Match ( AT1G79440.1 )
(BLAST)

001: MVIGAAARVA IGGCRKLISS HTSLLLVSSQ CRQMSMDAQS VSEKLRSSGL LRTQGLIGGK WLDSYDNKTI KVNNPATGEI IADVACMGTK ETNDAIASSY
101: EAFTSWSRLT AGERSKVLRR WYDLLIAHKE ELGQLITLEQ GKPLKEAIGE VAYGASFIEY YAEEAKRVYG DIIPPNLSDR RLLVLKQPVG VVGAITPWNF
201: PLAMITRKVG PALASGCTVV VKPSELTPLT ALAAAELALQ AGVPPGALNV VMGNAPEIGD ALLTSPQVRK ITFTGSTAVG KKLMAAAAPT VKKVSLELGG
301: NAPSIVFDDA DLDVAVKGTL AAKFRNSGQT CVCANRVLVQ DGIYDKFAEA FSEAVQKLEV GDGFRDGTTQ GPLINDAAVQ KVETFVQDAV SKGAKIIIGG
401: KRHSLGMTFY EPTVIRDVSD NMIMSKEEIF GPVAPLIRFK TEEDAIRIAN DTIAGLAAYI FTNSVQRSWR VFEALEYGLV GVNEGLISTE VAPFGGVKQS
501: GLGREGSKYG MDEYLEIKYV CLGDMNRH

Arabidopsis Description

ALDH5F1Succinate-semialdehyde dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAK4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.