CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 3
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005818_P001	Maize	cytosol	97.84	97.46
Os09t0440300-01	Rice	cytosol, mitochondrion, peroxisome, plastid	92.34	92.34
TraesCS5B01G210100.1	Wheat	peroxisome	90.96	90.96
TraesCS5D01G218400.1	Wheat	peroxisome	90.77	90.77
TraesCS5A01G213600.1	Wheat	golgi, unclear	90.77	90.77
Zm00001d003983_P002	Maize	cytosol	37.52	88.84
GSMUA_Achr8P23610_001	Banana	cytosol, peroxisome, plastid	85.66	84.66
KRH12550	Soybean	mitochondrion	81.34	81.5
KRH37502	Soybean	endoplasmic reticulum	81.14	81.14
HORVU5Hr1G062090.1	Barley	plastid	90.96	80.94
VIT_11s0016g00900.t01	Wine grape	cytosol	80.55	80.71
PGSC0003DMT400058895	Potato	cytosol	80.55	80.55
AT1G54100.2	Thale cress	peroxisome	78.98	79.13
Bra030906.1-P	Field mustard	cytosol, peroxisome, plastid	78.0	78.77
CDY61473	Canola	cytosol, peroxisome, plastid	77.8	78.57
CDY02483	Canola	cytosol, peroxisome, plastid	78.59	77.82
Solyc03g122310.2.1	Tomato	nucleus	77.6	74.39
CDY51401	Canola	cytosol	31.24	72.27
Bra037964.1-P	Field mustard	cytosol	30.26	66.96
Zm00001d050495_P001	Maize	plastid	31.43	53.33
Zm00001d008814_P001	Maize	cytosol	16.7	38.29
KXG26485	Sorghum	peroxisome	27.7	27.87
EES00989	Sorghum	cytosol	27.11	27.38
EES13852	Sorghum	peroxisome	26.92	27.13
KXG29578	Sorghum	mitochondrion	27.11	26.19
KXG32803	Sorghum	cytosol	25.15	25.55
KXG30827	Sorghum	mitochondrion, plastid	27.11	25.05
KXG19772	Sorghum	mitochondrion	27.11	24.82
KXG20268	Sorghum	cytosol	25.15	24.57
EES13911	Sorghum	cytosol	22.79	23.29
EER95994	Sorghum	mitochondrion	23.97	22.59
EER99950	Sorghum	endoplasmic reticulum	21.02	18.04

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	EntrezGene:8080995	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	UniProt:C5XDP9	EnsemblPlants:EER98972	ProteinID:EER98972
ProteinID:EER98972.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	PFAM:PF00171	ScanProsite:PS00687
PANTHER:PTHR43521	PANTHER:PTHR43521:SF1	EnsemblPlantsGene:SORBI_3002G215700	SUPFAM:SSF53720	unigene:Sbi.482	UniParc:UPI0001A8410E
RefSeq:XP_002462451.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:60779264..60786533

Molecular Weight (calculated)

54406.0 Da

IEP (calculated)

6.399

GRAVY (calculated)

0.126

Length

509 amino acids

Sequence
(BLAST)

001: MGAFAKEEHQ FLAELGLAQR NPGAFVCGAW GGSGPAVTST SPTNNQVIAE VVEASVQDYE EGMRACFDAA KTWMAFPAPK RGEIVRQIGD ALRAKLHHLG
101: RLVSLEMGKI LPEGIGEVQE IIDMCDYAVG LSRQLNGSII PSERPNHMMM EVWNPLGVVG VITAFNFPCA VLGWNACIAL VCGNCVVWKG APTTPLITIA
201: MTKIVASVLE KNNLPGAIFT SFCGGTEIGQ AIAVDTRIPL VSFTGSTRAG LMVQQQVNAR FGKCLLELSG NNAIIVMDDA DIQLAVRSVL FAAVGTAGQR
301: CTTCRRLILH ESIYQTFLDQ LVEVYKQVRI GDPLEKGTLL GPLHTPASKE NFLKGVQTIK SQGGKILFGG SAIESEGNFV QPTIVEITPS AAVVKEELFG
401: PVLYVMKFQS LKEAIEINNS VPQGLSSSIF TKRPEIIFKW LGPHGSDCGI VNVNIPTNGA EIGGAFGGEK ATGGGREAGS DSWKQYMRRA TCTINYGSEL
501: PLAQGINFG

Best Arabidopsis Sequence Match ( AT1G54100.1 )
(BLAST)

001: MGSANNEYEF LSEIGLTSHN LGSYVAGKWQ ANGPLVSTLN PANNQPIAQV VEASLEDYEQ GLKACEEAAK IWMQVTAPKR GDIVRQIGDA LRSKLDYLGR
101: LLSLEMGKIL AEGIGEVQEV IDMCDFAVGL SRQLNGSVIP SERPNHMMLE MWNPLGIVGV ITAFNFPCAV LGWNACIALV CGNCVVWKGA PTTPLITIAM
201: TKLVAEVLEK NNLPGAIFTA MCGGAEIGEA IAKDTRIPLV SFTGSSRVGS MVQQTVNARS GKTLLELSGN NAIIVMDDAD IQLAARSVLF AAVGTAGQRC
301: TTCRRLLLHE SVYDKVLEQL LTSYKQVKIG NPLEKGTLLG PLHTPESKKN FEKGIEVIKS QGGKILTGGK AVEGEGNFVE PTIIEISADA AVVKEELFAP
401: VLYVLKFKSF GEAVAINNSV PQGLSSSIFT RNPENIFRWI GPLGSDCGIV NVNIPTNGAE IGGAFGGEKA TGGGREAGSD SWKQYMRRST CTINYGNELP
501: LAQGINFG

Arabidopsis Description

ALDH7B4ALDH7B4 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F2]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.