CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0591000-01	Rice	cytosol	86.03	85.86
TraesCS3D01G412700.2	Wheat	golgi	85.43	85.6
TraesCS3B01G452100.1	Wheat	golgi	85.43	85.6
TraesCS3A01G417200.1	Wheat	cytosol	85.23	85.4
HORVU3Hr1G092680.2	Barley	mitochondrion, peroxisome, plastid	84.23	80.38
Zm00001d044339_P003	Maize	cytosol, peroxisome, plasma membrane	88.42	75.99
EES00989	Sorghum	cytosol	72.06	71.63
KRH48412	Soybean	nucleus	70.86	70.86
KRH39268	Soybean	nucleus	70.86	70.86
KRH60293	Soybean	nucleus	70.66	70.52
KRH41586	Soybean	nucleus	70.46	70.46
KRH48414	Soybean	peroxisome	27.74	70.2
PGSC0003DMT400000852	Potato	cytosol	69.46	69.6
Solyc12g007030.1.1	Tomato	cytosol	69.26	69.4
AT3G24503.1	Thale cress	peroxisome	68.66	68.66
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	68.46	68.46
KRH48410	Soybean	cytosol	68.26	68.26
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	68.26	68.26
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	70.06	67.89
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	67.66	67.66
KRH41589	Soybean	nucleus	68.06	67.52
KRH39270	Soybean	cytosol	67.47	67.47
KXG20268	Sorghum	cytosol	69.06	66.41
KRH60295	Soybean	mitochondrion, plastid	67.66	63.01
KXG30827	Sorghum	mitochondrion, plastid	59.28	53.9
KXG19772	Sorghum	mitochondrion	59.28	53.42
GSMUA_Achr3P26460_001	Banana	cytosol	72.06	46.1
EES13852	Sorghum	peroxisome	40.92	40.59
KXG26485	Sorghum	peroxisome	39.72	39.33
KXG29578	Sorghum	mitochondrion	40.92	38.9
EES13911	Sorghum	cytosol	29.54	29.72
EER98972	Sorghum	cytosol, peroxisome, plasma membrane	25.55	25.15
EER95994	Sorghum	mitochondrion	26.95	25.0
EER99950	Sorghum	endoplasmic reticulum	28.54	24.11

Protein Annotations

MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	UniProt:A0A1B6Q4H1	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162
InterPro:IPR016163	EnsemblPlants:KXG32803	ProteinID:KXG32803	ProteinID:KXG32803.1	PFAM:PF00171	ScanProsite:PS00070
ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF227	EnsemblPlantsGene:SORBI_3003G203500	SUPFAM:SSF53720	UniParc:UPI0002207277
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:53331225..53339384

Molecular Weight (calculated)

54339.5 Da

IEP (calculated)

6.334

GRAVY (calculated)

-0.061

Length

501 amino acids

Sequence
(BLAST)

001: MATTNGSSKV FEVPKVEVRF TKLFIDGKFV DAVSGKTFET RDPRTGEVIA TVAEGDKADV DLAVKAAREA FDNGPWPRMT GYERGRILHK FADLIDEHVE
101: ELAMLDTVDA GKLFLVGKVR DIPGAAHLLR YYAGAADKIH GETLKMAQRM HGYTLKEPVG VVGHIVPWNY PSTMFFFKVG PALAAGCTVV VKPAEQTPLS
201: ALFYAHLARE AGVPDGVLNV VPGFGPTAGA AVASHMDVDK VSFTGSTEVG RVVMKAAAES NLKPVSLELG GKSPVIVFDD ADLDMAVNLV NLATYTNKGE
301: ICVAGTRIYV QEGIYDAFVE KAAELAKKSV VGDPFNPRVN QGPQVDKDQY QKVLKYIDMG KREGATLVTG GKPCGDKGYY IEPTIFTDVK DNMTIAQDEI
401: FGPVMALMKF KTVEEVIQKA NNTRYGLAAG IVTKNIDIAN TVSRSIRAGA IWINCYFAFD PDAPFGGYKM SGFGKDMGMD ALEKYLQTKT VVTPLYNTPW
501: L

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.