Factsheet for GSMUA_Achr3P26460_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P04810_001	Banana	cytosol	41.51	75.58
Os01t0591000-01	Rice	cytosol	47.51	74.1
TraesCS1D01G310100.1	Wheat	peroxisome	46.74	73.94
TraesCS1A01G310600.1	Wheat	peroxisome	46.74	73.79
TraesCS1B01G321900.1	Wheat	peroxisome	46.36	73.33
GSMUA_Achr5P24920_001	Banana	cytosol	47.0	73.02
HORVU1Hr1G068020.1	Barley	cytosol	46.49	72.95
HORVU0Hr1G031700.1	Barley	cytosol	46.49	72.95
TraesCS3D01G412700.2	Wheat	golgi	46.36	72.6
TraesCS3A01G417200.1	Wheat	cytosol	46.23	72.4
TraesCS3A01G212300.1	Wheat	peroxisome	46.49	72.37
Zm00001d044340_P001	Maize	cytosol	47.13	72.21
TraesCS3B01G452100.1	Wheat	golgi	46.1	72.2
Os01t0591300-01	Rice	cytosol	46.74	72.19
KRH48412	Soybean	nucleus	46.1	72.06
KXG32803	Sorghum	cytosol	46.1	72.06
HORVU0Hr1G028680.4	Barley	peroxisome	38.7	71.97
EES00989	Sorghum	cytosol	46.23	71.83
KRH39268	Soybean	nucleus	45.59	71.26
Zm00001d011259_P001	Maize	cytosol	46.49	71.09
PGSC0003DMT400000852	Potato	cytosol	45.08	70.6
Solyc12g007030.1.1	Tomato	cytosol	44.96	70.4
KRH41586	Soybean	nucleus	44.96	70.26
KRH60293	Soybean	nucleus	44.57	69.52
KRH48410	Soybean	cytosol	44.06	68.86
HORVU3Hr1G092680.2	Barley	mitochondrion, peroxisome, plastid	46.1	68.76
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	43.81	68.46
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	43.68	68.26
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	43.68	68.26
KRH41589	Soybean	nucleus	43.81	67.92
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	44.7	67.7
KRH39270	Soybean	cytosol	43.3	67.66
AT3G24503.1	Thale cress	peroxisome	43.04	67.27
KRH48414	Soybean	peroxisome	16.86	66.67
KRH60295	Soybean	mitochondrion, plastid	43.68	63.57
Zm00001d044339_P003	Maize	cytosol, peroxisome, plasma membrane	42.78	57.46
GSMUA_Achr3P06170_001	Banana	mitochondrion	34.99	51.5
GSMUA_Achr5P05290_001	Banana	mitochondrion	35.5	51.29
GSMUA_Achr9P16120_001	Banana	peroxisome	26.95	41.78
GSMUA_Achr5P26830_001	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	18.9	41.46
GSMUA_Achr6P01980_001	Banana	cytosol	18.39	29.03
GSMUA_Achr7P19330_001	Banana	cytosol	18.39	28.97
GSMUA_Achr4P22360_001	Banana	mitochondrion	18.9	27.51
GSMUA_Achr8P23610_001	Banana	cytosol, peroxisome, plastid	15.96	24.27
GSMUA_Achr11P...	Banana	endoplasmic reticulum	17.5	23.06
GSMUA_Achr8P10590_001	Banana	endoplasmic reticulum	17.5	23.03

Protein Annotations

MapMan:15.5.37	MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr3G26460_001
EnsemblPlants:GSMUA_Achr3P26460_001	EnsemblPlants:GSMUA_Achr3T26460_001	InterPro:IPR006458	InterPro:IPR016162	InterPro:IPR016163	UniProt:M0SI12
InterPro:Ovate_C	PFAM:PF00171	PFAM:PF04844	ScanProsite:PS00070	ScanProsite:PS00687	PFscan:PS51754
PANTHER:PTHR11699	PANTHER:PTHR11699:SF182	SUPFAM:SSF53720	TIGRFAMs:TIGR01568	UniParc:UPI0002958FF2	SEG:seg

Description

Aldehyde dehydrogenase family 2 member C4 [Source:GMGC_GENE;Acc:GSMUA_Achr3G26460_001]

Coordinates

chr3:-:26291441..26295919

Molecular Weight (calculated)

85804.0 Da

IEP (calculated)

6.544

GRAVY (calculated)

-0.292

Length

783 amino acids

Sequence
(BLAST)

001: MENHRCNGDG KESFKPPEIK FTKLFVNGQF VDSVSGKTFE TVNPATGEVI AKVAEGVEAD IDLAVKAARE AFDHGRWPRM SGFERGRIMS KFADLIEQNI
101: EELAALDSVD AGKLLASGKT VDIPHCLHIL RYYAGAADKV HGETLKLAGE YQGYTLLEPI GVVGHIIPWN YPSTMFLMKS SPALAAGCTM VVKPAEQTPL
201: SALFYAHLAK QAGIPDGVIN VVNGFGPTAG AALCSHMDVD AISFTGSTET GRLVMEAAAK SNLKTVSLEL GGKSPLIIFD DADVDMAGEI CVAGSRVYVQ
301: EGIYDEFVRK AAESAKSWVV GDPFDPNVQQ GPQVDKTQFE RVLSYIELGK TEGATLLTGG RRCGDKGYYI EPTIFTDVKE EMRIAQEEIF GPVMSLMKFK
401: TIEEAIEKAN ATRYGLAAGI VTKDLNTANR VTRSVRAGTI WINCYFAFDP GCPFGGYKMS GFGRDLGMHA INKYLQVKSV IEQYLFSPMR SDHSGTAASL
501: YVYIIAIDSL CLSPRKRSGE ERERVGMGKK GLPKSLRTYL SKLKKVPAHL HIPNSPHPAT ATSWLLSACK YPKTPSFAAG RDHPDDDGGH GHEHRHDHGL
601: DLAATLSDVD RFLHENFNSI YPREDDGDEF SSSEPPASAT SSSFSSSPSV SCSFQESSDA GAEVPGGGVA VMTFSKDPYD DFRRSMQDMV EARHVDPNQP
701: LDWDFMEELL FCYLDLNDHS VHKHILRAFT ELTASFRRRV MVRRRRAPSG GNVTSRRMMM SRRPADAAGD GCMVVPRHFP PTR

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.