Factsheet for TraesCS1B01G321900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G310100.1	Wheat	peroxisome	98.99	98.99
TraesCS1A01G310600.1	Wheat	peroxisome	97.98	97.78
HORVU0Hr1G031700.1	Barley	cytosol	96.97	96.19
HORVU1Hr1G068020.1	Barley	cytosol	96.97	96.19
TraesCS3A01G212300.1	Wheat	peroxisome	97.37	95.83
HORVU0Hr1G028680.4	Barley	peroxisome	79.8	93.82
EES00989	Sorghum	cytosol	89.7	88.1
Zm00001d044340_P001	Maize	cytosol	89.9	87.08
Os01t0591300-01	Rice	cytosol	87.68	85.6
Zm00001d011259_P001	Maize	cytosol	88.28	85.35
KRH48414	Soybean	peroxisome	28.08	70.2
TraesCS3B01G452100.1	Wheat	golgi	70.91	70.2
KRH39268	Soybean	nucleus	69.49	68.66
KRH48412	Soybean	nucleus	69.49	68.66
KRH41586	Soybean	nucleus	69.29	68.46
TraesCS7B01G259100.1	Wheat	peroxisome	70.71	68.23
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	68.89	68.06
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	68.69	67.86
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	68.69	67.86
KRH60293	Soybean	nucleus	68.48	67.53
AT3G24503.1	Thale cress	peroxisome	68.28	67.47
TraesCS7B01G259200.1	Wheat	peroxisome	69.9	67.45
KRH48410	Soybean	cytosol	68.08	67.27
KRH39270	Soybean	cytosol	67.27	66.47
Solyc12g007030.1.1	Tomato	cytosol	66.46	65.8
KRH41589	Soybean	nucleus	67.07	65.74
PGSC0003DMT400000852	Potato	cytosol	66.26	65.6
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	67.47	64.6
KRH60295	Soybean	mitochondrion, plastid	67.27	61.9
TraesCS7B01G116800.1	Wheat	mitochondrion	57.17	51.27
TraesCS6B01G321400.1	Wheat	mitochondrion	43.03	49.65
GSMUA_Achr3P26460_001	Banana	cytosol	73.33	46.36
TraesCS2B01G346000.1	Wheat	mitochondrion	26.46	42.12
TraesCS6B01G408100.1	Wheat	mitochondrion	40.2	39.56
TraesCS6B01G183600.3	Wheat	mitochondrion	40.61	38.21
TraesCS2B01G216400.1	Wheat	cytosol	28.08	28.02
TraesCS5B01G210100.1	Wheat	peroxisome	27.27	26.52
TraesCS2B01G501200.1	Wheat	golgi, mitochondrion, unclear	28.08	26.03
TraesCS2B01G111400.2	Wheat	vacuole	27.07	20.71

Protein Annotations

MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF182	SUPFAM:SSF53720
EnsemblPlantsGene:TraesCS1B01G321900	EnsemblPlants:TraesCS1B01G321900.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1B:+:546272671..546277811

Molecular Weight (calculated)

53621.7 Da

IEP (calculated)

5.524

GRAVY (calculated)

-0.007

Length

495 amino acids

Sequence
(BLAST)

001: MGSNEMVVVP EIKHTKLFIN GEFVDAASGK TFETRDPRTG DVLAHIAEAD KADVDLAVNA AREAFEHGKW PRMSGYERGR AMHKLADLME QHTEELAALD
101: GADAGKLLLL GKIIDIPAAV QMLRYYAGAA DKIHGDSLRV SGKYQGYTLK EPIGVVGIII PWNFPSLMFF LKISPALAAG CTVVVKPAEQ TPLSALYYAH
201: LAKLAGIPDG VINVVPGFGP TAGAAIASHM DVDSVAFTGS GEVGRLIMEA SARSNLKTVS LELGGKSPLI IFDDADVDMA VELSRLAIFF NKGEVCVAGS
301: RVYVQEGIYD EFVKKAVVAA QNWKVGDPFD VATNMGPQVD KEQFERVLRY IEHGKSEGAT LLTGGKRAGD KGYYIEPTIF ADVKEDMKIA QDEIFGPVMS
401: LMKFKTVDEA IEKANCTKYG LAAGIITKNL DIANKVSRSV RAGTVWVNCY FAFDPEAPFG GYKMSGFGRD QGMMAMDKYM QVKSVITAVP DSPWY

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.