Factsheet for Solyc12g007030.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000852	Potato	cytosol	96.8	96.8
KRH48412	Soybean	nucleus	73.6	73.45
KRH39268	Soybean	nucleus	72.6	72.46
KRH41586	Soybean	nucleus	72.0	71.86
GSMUA_Achr6P04810_001	Banana	cytosol	61.4	71.4
KRH60293	Soybean	nucleus	71.6	71.31
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	71.2	71.06
TraesCS3B01G452100.1	Wheat	golgi	71.0	71.0
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	71.0	70.86
TraesCS3A01G417200.1	Wheat	cytosol	70.6	70.6
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	70.4	70.26
TraesCS3D01G412700.2	Wheat	golgi	70.2	70.2
KRH48410	Soybean	cytosol	70.0	69.86
GSMUA_Achr5P24920_001	Banana	cytosol	70.2	69.64
KRH41589	Soybean	nucleus	70.2	69.5
KRH39270	Soybean	cytosol	69.4	69.26
KXG32803	Sorghum	cytosol	69.4	69.26
Os01t0591000-01	Rice	cytosol	69.2	68.92
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	71.2	68.86
AT3G24503.1	Thale cress	peroxisome	68.2	68.06
HORVU3Hr1G092680.2	Barley	mitochondrion, peroxisome, plastid	69.8	66.48
TraesCS1D01G310100.1	Wheat	peroxisome	65.8	66.46
TraesCS1B01G321900.1	Wheat	peroxisome	65.8	66.46
Os01t0591300-01	Rice	cytosol	67.2	66.27
EES00989	Sorghum	cytosol	66.8	66.27
TraesCS1A01G310600.1	Wheat	peroxisome	65.4	65.93
Zm00001d044340_P001	Maize	cytosol	67.2	65.75
HORVU0Hr1G031700.1	Barley	cytosol	65.4	65.53
TraesCS7D01G353900.1	Wheat	peroxisome	67.4	65.44
HORVU1Hr1G068020.1	Barley	cytosol	65.2	65.33
TraesCS7B01G259100.1	Wheat	peroxisome	67.0	65.3
TraesCS3A01G212300.1	Wheat	peroxisome	65.6	65.21
KRH60295	Soybean	mitochondrion, plastid	69.8	64.87
HORVU0Hr1G028680.4	Barley	peroxisome	54.6	64.85
TraesCS7A01G369400.1	Wheat	unclear	66.4	64.47
TraesCS7B01G259200.1	Wheat	peroxisome	65.6	63.94
Zm00001d011259_P001	Maize	cytosol	65.4	63.87
TraesCS7D01G354000.1	Wheat	peroxisome	65.2	63.55
KXG20268	Sorghum	cytosol	64.4	61.8
Zm00001d036933_P001	Maize	cytosol	65.6	61.54
HORVU7Hr1G085120.2	Barley	mitochondrion	66.8	59.86
TraesCS7A01G369300.1	Wheat	peroxisome	66.0	59.35
Zm00001d044339_P003	Maize	cytosol, peroxisome, plasma membrane	65.4	56.09
Solyc02g086970.2.1	Tomato	cytosol	51.2	54.12
Solyc08g068190.2.1	Tomato	nucleus, unclear	55.8	52.25
Solyc03g114150.2.1	Tomato	plastid	55.2	51.59
Solyc05g005700.2.1	Tomato	mitochondrion, unclear	53.8	50.85
GSMUA_Achr3P26460_001	Banana	cytosol	70.4	44.96
Solyc06g071290.2.1	Tomato	plastid	41.2	40.87
Solyc03g113800.2.1	Tomato	plastid	39.8	39.41
Solyc09g090700.1.1	Tomato	plastid	36.8	35.25
Solyc07g005390.2.1	Tomato	cytosol, extracellular, nucleus, plastid	28.2	28.43
Solyc12g099290.1.1	Tomato	plastid	29.4	24.79
Solyc03g122310.2.1	Tomato	nucleus	25.4	23.92

Protein Annotations

MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004029
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009699	GO:GO:0009987	GO:GO:0016491
GO:GO:0016620	GO:GO:0019748	GO:GO:0050269	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163
UniProt:K4DBP0	PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF182
SUPFAM:SSF53720	EnsemblPlantsGene:Solyc12g007030.1	EnsemblPlants:Solyc12g007030.1.1	UniParc:UPI000276AAE4	SEG:seg	:

Description

Aldehyde dehydrogenase family 2 member C4 [Source:Projected from Arabidopsis thaliana (AT3G24503) UniProtKB/Swiss-Prot;Acc:Q56YU0]

Coordinates

chr12:-:1463785..1469521

Molecular Weight (calculated)

54882.5 Da

IEP (calculated)

5.265

GRAVY (calculated)

-0.015

Length

500 amino acids

Sequence
(BLAST)

001: MAEMNGNSET QFQIPKIKFT KLFINGEFVD SVSGNTFETI DPRNEEVIAR ISEGDKEDID LAVKAAREAF DNGPWPRLSA AERRRIMLKF ADLIIENAEE
101: IAALDAMDAG KLFVPVKNMD IPAAAEIIRY YAGAADKIHG TTLKMSREMQ GYTLLEPIGV VGHIIPWNFP TQMFLMKVGP ALAAGCTMIV KPAEQTPLSA
201: LYYAQLAKQA GVPDGVINVV TGFGSTAGAA LCSHMDVDKI SFTGSTEVGR LVMQAAALSN LKPVSLELGG KSPFIVFDDV DVDKVAPLAL VGILFNKGEI
301: CVAGSRLFIQ EGIYDKFVKK LEQMVKTWVV GDPFDPNSHQ GPQVDKKQYE RVLSYIEHGK REGAKLLTGG NALDRKGYFI EPTIFIDVED DMKIAKEEIF
401: GPVLAVMKFK TVEEVIKRAN CTNYGLAAGV MTNNLNIANT VSRSIRAGVI WINCYFAFDP DCPYGGYKCS GFERDLGMEG LHKYLQVKSV ATPIYNSPWL

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.