Factsheet for GSMUA_Achr5P24920_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P04810_001	Banana	cytosol	76.39	89.53
KRH48414	Soybean	peroxisome	28.77	73.23
KRH48412	Soybean	nucleus	72.02	72.46
TraesCS7D01G353900.1	Wheat	peroxisome	73.81	72.23
KRH39268	Soybean	nucleus	71.63	72.06
TraesCS7B01G259100.1	Wheat	peroxisome	73.21	71.93
TraesCS7A01G369400.1	Wheat	unclear	73.02	71.46
TraesCS7B01G259200.1	Wheat	peroxisome	72.42	71.15
PGSC0003DMT400000852	Potato	cytosol	70.24	70.8
TraesCS7D01G354000.1	Wheat	peroxisome	71.83	70.57
KRH48410	Soybean	cytosol	70.04	70.46
Solyc12g007030.1.1	Tomato	cytosol	69.64	70.2
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	69.64	70.06
KRH41586	Soybean	nucleus	69.64	70.06
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	69.44	69.86
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	69.25	69.66
KRH60293	Soybean	nucleus	69.05	69.32
AT3G24503.1	Thale cress	peroxisome	68.85	69.26
KRH39270	Soybean	cytosol	68.85	69.26
KRH41589	Soybean	nucleus	69.05	68.91
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	70.04	68.28
KXG20268	Sorghum	cytosol	68.85	66.6
TraesCS7A01G369300.1	Wheat	peroxisome	72.82	66.01
HORVU7Hr1G085120.2	Barley	mitochondrion	73.02	65.95
Zm00001d036933_P001	Maize	cytosol	69.64	65.85
KRH60295	Soybean	mitochondrion, plastid	68.65	64.31
GSMUA_Achr3P06170_001	Banana	mitochondrion	56.15	53.2
GSMUA_Achr5P05290_001	Banana	mitochondrion	55.56	51.66
GSMUA_Achr3P26460_001	Banana	cytosol	73.02	47.0
GSMUA_Achr9P16120_001	Banana	peroxisome	43.45	43.37
GSMUA_Achr5P26830_001	Banana	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	30.56	43.14
GSMUA_Achr7P19330_001	Banana	cytosol	27.58	27.97
GSMUA_Achr6P01980_001	Banana	cytosol	27.38	27.82
GSMUA_Achr4P22360_001	Banana	mitochondrion	28.57	26.77
GSMUA_Achr8P23610_001	Banana	cytosol, peroxisome, plastid	25.0	24.47
GSMUA_Achr8P10590_001	Banana	endoplasmic reticulum	27.58	23.36
GSMUA_Achr11P...	Banana	endoplasmic reticulum	27.38	23.23

Protein Annotations

MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_GLU
InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr5G24920_001	EnsemblPlants:GSMUA_Achr5P24920_001	EnsemblPlants:GSMUA_Achr5T24920_001
InterPro:IPR016162	InterPro:IPR016163	UniProt:M0T1G7	PFAM:PF00171	ScanProsite:PS00687	PANTHER:PTHR11699
PANTHER:PTHR11699:SF182	SUPFAM:SSF53720	UniParc:UPI000296D7B2	SEG:seg	:	:

Description

Aldehyde dehydrogenase family 2 member C4 [Source:GMGC_GENE;Acc:GSMUA_Achr5G24920_001]

Coordinates

chr5:-:26117167..26119366

Molecular Weight (calculated)

54960.3 Da

IEP (calculated)

6.201

GRAVY (calculated)

0.013

Length

504 amino acids

Sequence
(BLAST)

001: MASEANSSAG DGLKLPEIKF TKLFINGCFV DAVSGKTFES LDPRNGEVIA NIAAGDKEDV DLAVKAAREA FDHGKWPRMS GAERGKIMMK YADLIEQHAE
101: ELAALECLDA GKLFFLNKMN DVPVASNLVR YYAGAADKIH GETLKLSGEF QGYTLREPIG VVGHIIPWNF PTIMFFFKVA PALAAGCTML VKPAEQTPLT
201: ALYCAHLAKQ AGFPDGVLNV VTGFGATAGA AISSHMDVDK VSFTGSTEVG RLVMEAAARS NLKSVSLELG GKSPVIICDD ADIDMAVELA RTAIFYNKAW
301: IGEICVAGSR VYVQEGIYDE FVRKIAESCK SWIVGDPFSP HVHQGPQVDK KQFDKVLRYI DHGKREGATI LTGGKACGEK GFYIEPTIFT DVKVDMLIAQ
401: DEIFGPVMSL MKFKTIEEAI ERANDTRYGL AAGIVTKDIN IANRLSRSIR AGIIWINCYL VFDNDCPFGG YKMSGFGRDN GMHALEKYLQ VKSVVIPIYG
501: SPWR

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.