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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytoskeleton, cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX94807 Canola cytoskeleton, cytosol, peroxisome 88.02 88.02
Bra001952.1-P Field mustard cytoskeleton, cytosol, peroxisome 88.02 88.02
CDX93017 Canola cytoskeleton, cytosol, peroxisome 88.02 88.02
KRH48412 Soybean nucleus 70.86 70.86
KRH41586 Soybean nucleus 70.46 70.46
GSMUA_Achr6P04810_001 Banana cytosol 60.28 70.23
KRH39268 Soybean nucleus 70.06 70.06
KRH60293 Soybean nucleus 69.66 69.52
TraesCS3A01G417200.1 Wheat cytosol 68.86 69.0
PGSC0003DMT400000852 Potato cytosol 68.86 69.0
GSMUA_Achr5P24920_001 Banana cytosol 69.26 68.85
HORVU0Hr1G031700.1 Barley cytosol 68.46 68.74
KXG32803 Sorghum cytosol 68.66 68.66
HORVU1Hr1G068020.1 Barley cytosol 68.26 68.54
TraesCS3D01G412700.2 Wheat golgi 68.26 68.4
TraesCS1B01G321900.1 Wheat peroxisome 67.47 68.28
TraesCS1D01G310100.1 Wheat peroxisome 67.47 68.28
KRH48410 Soybean cytosol 68.26 68.26
TraesCS3B01G452100.1 Wheat golgi 68.06 68.2
Solyc12g007030.1.1 Tomato cytosol 68.06 68.2
KRH41589 Soybean nucleus 68.66 68.12
TraesCS1A01G310600.1 Wheat peroxisome 67.07 67.74
KRH39270 Soybean cytosol 67.66 67.66
Os01t0591000-01 Rice cytosol 67.66 67.53
TraesCS3A01G212300.1 Wheat peroxisome 67.47 67.2
EES00989 Sorghum cytosol 66.87 66.47
HORVU0Hr1G028680.4 Barley peroxisome 55.69 66.27
KRH39267 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 68.26 66.15
Zm00001d044340_P001 Maize cytosol 67.47 66.14
Os01t0591300-01 Rice cytosol 66.27 65.48
HORVU3Hr1G092680.2 Barley mitochondrion, peroxisome, plastid 68.46 65.33
Zm00001d011259_P001 Maize cytosol 65.67 64.26
KRH60295 Soybean mitochondrion, plastid 68.26 63.57
TraesCS7B01G259100.1 Wheat peroxisome 64.87 63.35
TraesCS7B01G259200.1 Wheat peroxisome 64.07 62.57
KXG20268 Sorghum cytosol 65.07 62.57
TraesCS7D01G353900.1 Wheat peroxisome 64.27 62.52
TraesCS7D01G354000.1 Wheat peroxisome 63.67 62.18
TraesCS7A01G369400.1 Wheat unclear 63.27 61.55
Zm00001d036933_P001 Maize cytosol 63.67 59.85
TraesCS7A01G369300.1 Wheat peroxisome 64.27 57.91
HORVU7Hr1G085120.2 Barley mitochondrion 64.07 57.53
Zm00001d044339_P003 Maize cytosol, peroxisome, plasma membrane 62.67 53.86
AT3G48000.1 Thale cress mitochondrion 56.89 52.97
AT1G23800.1 Thale cress mitochondrion 54.89 51.5
AT1G74920.1 Thale cress cytosol, peroxisome, plastid 43.71 43.71
AT3G48170.1 Thale cress mitochondrion, peroxisome 43.71 43.54
GSMUA_Achr3P26460_001 Banana cytosol 67.27 43.04
AT1G79440.1 Thale cress mitochondrion 36.73 34.85
AT2G14170.1 Thale cress mitochondrion 31.14 25.7
AT1G54100.2 Thale cress peroxisome 25.95 25.59
AT2G24270.2 Thale cress cytosol 26.75 25.0
AT3G66658.2 Thale cress endoplasmic reticulum, extracellular, vacuole 26.75 22.48
Protein Annotations
MapMan:21.5.1Gene3D:3.40.309.10Gene3D:3.40.605.10EntrezGene:822042ProteinID:AEE76907.1EMBL:AF349448
EMBL:AK221230Symbol:ALDH2C4ArrayExpress:AT3G24503EnsemblPlantsGene:AT3G24503RefSeq:AT3G24503TAIR:AT3G24503
RefSeq:AT3G24503-TAIR-GEnsemblPlants:AT3G24503.1TAIR:AT3G24503.1EMBL:AY056398InterPro:Ald_DH/histidinol_DHInterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYSInterPro:Ald_DH_CS_GLUInterPro:Ald_DH_NInterPro:Aldehyde_DH_domProteinID:BAB01998.1GO:GO:0003674
GO:GO:0003824GO:GO:0004029GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005829GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009699GO:GO:0009987
GO:GO:0016491GO:GO:0016620GO:GO:0019748GO:GO:0043878GO:GO:0050269GO:GO:0055114
InterPro:IPR016162InterPro:IPR016163RefSeq:NP_566749.1PFAM:PF00171PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281ScanProsite:PS00070ScanProsite:PS00687
PANTHER:PTHR11699PANTHER:PTHR11699:SF182UniProt:Q56YU0SUPFAM:SSF53720UniParc:UPI000009EE03SEG:seg
Description
ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
Coordinates
chr3:-:8919560..8923296
Molecular Weight (calculated)
54363.3 Da
IEP (calculated)
5.380
GRAVY (calculated)
-0.085
Length
501 amino acids
Sequence
(BLAST)
001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.