Factsheet for TraesCS3A01G212300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G310100.1	Wheat	peroxisome	96.22	97.78
TraesCS1B01G321900.1	Wheat	peroxisome	95.83	97.37
TraesCS1A01G310600.1	Wheat	peroxisome	95.63	96.98
HORVU0Hr1G031700.1	Barley	cytosol	95.23	95.99
HORVU1Hr1G068020.1	Barley	cytosol	95.03	95.79
HORVU0Hr1G028680.4	Barley	peroxisome	78.13	93.35
EES00989	Sorghum	cytosol	88.27	88.1
Zm00001d044340_P001	Maize	cytosol	88.27	86.89
Os01t0591300-01	Rice	cytosol	86.68	86.0
Zm00001d011259_P001	Maize	cytosol	86.68	85.16
TraesCS3A01G417200.1	Wheat	cytosol	70.78	71.2
KRH48414	Soybean	peroxisome	27.63	70.2
KRH39268	Soybean	nucleus	68.19	68.46
KRH48412	Soybean	nucleus	68.19	68.46
KRH41586	Soybean	nucleus	67.99	68.26
TraesCS7A01G369400.1	Wheat	unclear	69.78	68.16
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	67.79	68.06
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	67.59	67.86
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	67.59	67.86
AT3G24503.1	Thale cress	peroxisome	67.2	67.47
KRH60293	Soybean	nucleus	67.0	67.13
KRH48410	Soybean	cytosol	66.8	67.07
KRH39270	Soybean	cytosol	65.81	66.07
KRH41589	Soybean	nucleus	66.2	65.94
Solyc12g007030.1.1	Tomato	cytosol	65.21	65.6
PGSC0003DMT400000852	Potato	cytosol	65.01	65.4
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	66.4	64.6
TraesCS7A01G369300.1	Wheat	peroxisome	71.17	64.39
KRH60295	Soybean	mitochondrion, plastid	66.0	61.71
TraesCS7A01G210100.1	Wheat	mitochondrion	56.66	51.91
GSMUA_Achr3P26460_001	Banana	cytosol	72.37	46.49
TraesCS6A01G371100.1	Wheat	golgi, nucleus, unclear	39.76	39.84
TraesCS2A01G336000.1	Wheat	peroxisome	41.95	38.79
TraesCS6A01G155500.1	Wheat	mitochondrion	39.16	37.45
TraesCS2A01G190700.1	Wheat	cytosol	28.03	28.43
TraesCS5A01G213600.1	Wheat	golgi, unclear	26.84	26.52
TraesCS2A01G477900.1	Wheat	mitochondrion	27.83	26.27
TraesCS2A01G096000.1	Wheat	vacuole	26.24	22.22

Protein Annotations

MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF182	SUPFAM:SSF53720
EnsemblPlantsGene:TraesCS3A01G212300	EnsemblPlants:TraesCS3A01G212300.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:+:382356289..382360858

Molecular Weight (calculated)

54360.4 Da

IEP (calculated)

5.067

GRAVY (calculated)

-0.003

Length

503 amino acids

Sequence
(BLAST)

001: MGSNEGGGCD GKPVVVVPEI KYTKLFINGE FVDAASGKTF ETRDPRTGDV LAHIAEADKA DVDLAVEAAR EAFEHGKWPR MSGYERSRAM NKLADLMEQH
101: IEELAALDGA DAGKLLLLGK IIDIPSAVQM LRYYAGAADK IHGESLRVSG KYQGYTLKEP IGVVGIIIPW NFPSLMFFLK ISPALAAGCT VVVKPAEQTP
201: LSALYYAHLA KLAGIPDGVI NVVPGFGPTA GAAIASHMDV DSVAFTGSGE VGRLIMEASA RSNLKTVSLE LGGKSPLIIF DDADVDMAVE LSRLAIFFNK
301: GEVCVAGSRV YVQEGIYDEF VKRAVVAAQN WKVGDPFDVA TNMGPQVDKE QFERVLRYIE HGKSEGATLL TGGKPASDKG YYIEPTIFAD VKEDMKIAQD
401: EIFGPVMSLM KFKTVDEAIE KANCTKYGLA AGIITKNLDI ANRVSRSVRA GTVWVNCYFA FDPEAPFGGY KMSGFGRDQG MMAIDKYMQV KSVITAVPDS
501: PWY

Best Arabidopsis Sequence Match ( AT3G24503.1 )
(BLAST)

001: MENGKCNGAT TVKLPEIKFT KLFINGQFID AASGKTFETI DPRNGEVIAT IAEGDKEDVD LAVNAARYAF DHGPWPRMTG FERAKLINKF ADLIEENIEE
101: LAKLDAVDGG KLFQLGKYAD IPATAGHFRY NAGAADKIHG ETLKMTRQSL FGYTLKEPIG VVGNIIPWNF PSIMFATKVA PAMAAGCTMV VKPAEQTSLS
201: ALFYAHLSKE AGIPDGVLNI VTGFGSTAGA AIASHMDVDK VSFTGSTDVG RKIMQAAAAS NLKKVSLELG GKSPLLIFND ADIDKAADLA LLGCFYNKGE
301: ICVASSRVFV QEGIYDKVVE KLVEKAKDWT VGDPFDSTAR QGPQVDKRQF EKILSYIEHG KNEGATLLTG GKAIGDKGYF IQPTIFADVT EDMKIYQDEI
401: FGPVMSLMKF KTVEEGIKCA NNTKYGLAAG ILSQDIDLIN TVSRSIKAGI IWVNCYFGFD LDCPYGGYKM SGNCRESGMD ALDNYLQTKS VVMPLHNSPW
501: M

Arabidopsis Description

ALDH2C4Aldehyde dehydrogenase family 2 member C4 [Source:UniProtKB/Swiss-Prot;Acc:Q56YU0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.