Factsheet for TraesCS2A01G477900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

mitochondrion: 21043471
mitochondrion: 23895732
golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 21043471 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks, M316, The University of Western Australia, 35 Stirling Highway, Crawley,WA 6009, Australia.

msms PMID: 23895732 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks (CABiN), M316, The University of Western Australia , 35 Stirling Highway, Crawley, WA 6009, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G501200.1	Wheat	golgi, mitochondrion, unclear	99.06	98.88
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	98.87	98.69
HORVU2Hr1G107520.1	Barley	cytosol, peroxisome	57.41	95.92
Os07t0188800-01	Rice	mitochondrion	92.87	92.7
EER95994	Sorghum	mitochondrion	92.31	91.11
Zm00001d019054_P001	Maize	mitochondrion	90.81	90.13
HORVU2Hr1G107550.1	Barley	plasma membrane	97.37	89.48
GSMUA_Achr4P22360_001	Banana	mitochondrion	79.17	78.44
VIT_03s0132g00200.t01	Wine grape	mitochondrion	77.67	76.81
KRH42067	Soybean	mitochondrion	76.92	75.79
KRH49851	Soybean	mitochondrion	75.98	75.42
KRH10621	Soybean	cytosol	72.61	74.85
CDX81452	Canola	mitochondrion	73.55	74.38
Bra037214.1-P	Field mustard	mitochondrion	73.36	74.19
CDY37216	Canola	mitochondrion	73.17	74.0
PGSC0003DMT400027691	Potato	mitochondrion	74.3	73.74
KRH21731	Soybean	cytosol	37.9	64.74
AT2G14170.1	Thale cress	mitochondrion	73.17	64.25
VIT_03s0132g00230.t01	Wine grape	cytosol	53.1	48.96
KRH45519	Soybean	nucleus	62.66	33.3
TraesCS1A01G310600.1	Wheat	peroxisome	26.08	28.02
TraesCS3A01G417200.1	Wheat	cytosol	26.27	28.0
TraesCS3A01G212300.1	Wheat	peroxisome	26.27	27.83
TraesCS7A01G369400.1	Wheat	unclear	26.83	27.77
VIT_00s0218g00070.t01	Wine grape	cytosol	71.67	27.68
TraesCS7A01G210100.1	Wheat	mitochondrion	27.95	27.14
TraesCS6A01G155500.1	Wheat	mitochondrion	26.08	26.43
TraesCS6A01G371100.1	Wheat	golgi, nucleus, unclear	24.39	25.9
TraesCS7A01G369300.1	Wheat	peroxisome	26.27	25.18
TraesCS2A01G190700.1	Wheat	cytosol	23.26	25.0
TraesCS5A01G213600.1	Wheat	golgi, unclear	23.08	24.16
TraesCS2A01G336000.1	Wheat	peroxisome	24.58	24.08
TraesCS2A01G096000.1	Wheat	vacuole	22.33	20.03

Protein Annotations

KEGG:00280+1.2.1.27	KEGG:00640+1.2.1.27	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.7.6.3	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004491	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	InterPro:MeMal-semiAld_DH
PFAM:PF00171	ScanProsite:PS00070	PANTHER:PTHR43866	PANTHER:PTHR43866:SF5	SUPFAM:SSF53720	TIGRFAMs:TIGR01722
EnsemblPlantsGene:TraesCS2A01G477900	EnsemblPlants:TraesCS2A01G477900.1	TIGR:cd07085	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:-:716901065..716907402

Molecular Weight (calculated)

57071.4 Da

IEP (calculated)

5.964

GRAVY (calculated)

-0.000

Length

533 amino acids

Sequence
(BLAST)

001: MLRAVLLRSA SGLRRSPMAA PLSTAAASWL AEGTSSPPRV RLLIGGDFVE SKATEHVDVT NPATQEVVSR IPLTTADEFR AAVDAARTAF PGWRNTPVTA
101: RQRIMFKYQE LIRANMDKLA ENITTEQGKT LKDAWGDVFR GLEVVEHACG MGSLQMGEYV SNVSHGIDTF SIREPLGVCA GICPFNFPAM IPLWMFPIAV
201: TCGNTFVLKP SEKDPGAAMM LAELAMEAGL PKGVLNIVHG THDVVNNICD DEAIKAVSFV GSNTAGMHIY SRASASGKRV QCNMGAKNHA IILPDADRDA
301: TLNALIAAGF GAAGQRCMAL STAVFVGGSE PWEDELVKRA SNLVVNSGTA NDADLGPVIS TQAKDRICKL VQSGADSGAR LVLDGREIVV PQFEDGNFIG
401: PTVLADVKSD MECYQEEIFG PVLLLMKAES LDDAIQIVNR NKYGNGASIF TTSGVSARKF QTDIEAGQVG INVPIPVPLP FFSFTGSKAS FAGDLNFYGK
501: AGVQFFTQIK TITQQWKESS PQRVSLSMPT SQK

Best Arabidopsis Sequence Match ( AT2G14170.1 )
(BLAST)

001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ

Arabidopsis Description

ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.