CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

mitochondrion: 27780359

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49851	Soybean	mitochondrion	97.23	97.95
KRH10621	Soybean	cytosol	85.03	88.97
VIT_03s0132g00200.t01	Wine grape	mitochondrion	83.36	83.67
PGSC0003DMT400027691	Potato	mitochondrion	81.52	82.12
Bra037214.1-P	Field mustard	mitochondrion	79.67	81.78
CDX81452	Canola	mitochondrion	79.67	81.78
CDY37216	Canola	mitochondrion	79.48	81.59
GSMUA_Achr4P22360_001	Banana	mitochondrion	80.78	81.23
TraesCS2A01G477900.1	Wheat	mitochondrion	75.79	76.92
HORVU2Hr1G107520.1	Barley	cytosol, peroxisome	45.29	76.8
Os07t0188800-01	Rice	mitochondrion	75.79	76.78
TraesCS2B01G501200.1	Wheat	golgi, mitochondrion, unclear	75.6	76.59
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	75.42	76.4
KRH21731	Soybean	cytosol	43.99	76.28
Zm00001d019054_P001	Maize	mitochondrion	75.42	75.98
EER95994	Sorghum	mitochondrion	75.6	75.74
AT2G14170.1	Thale cress	mitochondrion	79.48	70.84
HORVU2Hr1G107550.1	Barley	plasma membrane	74.68	69.66
KRH45519	Soybean	nucleus	68.02	36.69
KRH41589	Soybean	nucleus	28.65	30.69
KRH41586	Soybean	nucleus	28.1	30.34
KRH48412	Soybean	nucleus	27.73	29.94
KRH48410	Soybean	cytosol	27.73	29.94
KRH60293	Soybean	nucleus	27.73	29.88
KRH39268	Soybean	nucleus	27.54	29.74
KRH39270	Soybean	cytosol	27.54	29.74
KRH03318	Soybean	mitochondrion	24.77	29.71
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.1	29.4
KRH48414	Soybean	peroxisome	10.72	29.29
KRH45689	Soybean	nucleus	28.65	28.92
KRG99327	Soybean	mitochondrion	28.47	28.73
KRH20324	Soybean	mitochondrion	28.65	28.7
KRH60295	Soybean	mitochondrion, plastid	28.47	28.62
KRH69545	Soybean	mitochondrion	28.47	28.57
KRH74615	Soybean	mitochondrion	28.28	28.44
KRG93347	Soybean	peroxisome	27.54	28.22
KRH54453	Soybean	endoplasmic reticulum	25.88	27.83
KRH13776	Soybean	mitochondrion	27.36	27.56
KRH43670	Soybean	mitochondrion	27.36	27.56
KRH54419	Soybean	nucleus	27.17	27.22
KRH57015	Soybean	endoplasmic reticulum	24.21	26.84
KRH72280	Soybean	cytosol, nucleus	23.84	25.96
KRH03077	Soybean	cytosol, nucleus	23.84	25.96
KRH05288	Soybean	cytosol	23.48	25.6
KRH37502	Soybean	endoplasmic reticulum	23.48	24.95
KRH12550	Soybean	mitochondrion	23.29	24.8
KRH63505	Soybean	mitochondrion	19.78	24.1
KRH11951	Soybean	endoplasmic reticulum	21.63	19.6
KRH36977	Soybean	endoplasmic reticulum, extracellular, vacuole	20.89	19.35
KRH50740	Soybean	endoplasmic reticulum	21.26	19.26
KRH02344	Soybean	endoplasmic reticulum	20.7	18.79

Protein Annotations

KEGG:00280+1.2.1.27	KEGG:00640+1.2.1.27	EntrezGene:100811544	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.7.6.3
EMBL:ACUP02004788	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom
EnsemblPlantsGene:GLYMA_08G0666001	GO:GO:0003674	GO:GO:0003824	GO:GO:0004491	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	UniProt:I1KQX0	InterPro:IPR016162	InterPro:IPR016163
ProteinID:KRH42066.1	EnsemblPlants:KRH42067	ProteinID:KRH42067	ProteinID:KRH42067.1	InterPro:MeMal-semiAld_DH	PFAM:PF00171
ScanProsite:PS00070	PANTHER:PTHR43866	PANTHER:PTHR43866:SF5	MetaCyc:PWY-5642	MetaCyc:PWY-6373	SUPFAM:SSF53720
TIGRFAMs:TIGR01722	UniParc:UPI00023383DB	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:5105453..5112177

Molecular Weight (calculated)

58258.2 Da

IEP (calculated)

7.819

GRAVY (calculated)

-0.054

Length

541 amino acids

Sequence
(BLAST)

001: METRMLRLSI QRVRKLNFLR PQISALGRSH LSTAAEPSSS KSNPPRVPNL IGGSFVDSKA STVIDVINPA TQEVVSQVPL STHEEFKAAV SAAKEAFPSW
101: RNTPITTRQR VMLKLQELIR RDMDKLALNV TTEQGKTLKD AQGDVFRGLE VVEHACGMAT LQMGEYVSNV SHGIDTYSIR EPLGVCAGIC PFNFPAMIPL
201: WMFPMAVTCG NTFVLKPSEK DPGASVMLAE LALEAGLPEG VLNIVHGTHD IVNAICDDEN IKAISFVGSN VAGMHIYSRA AAKGKRVQSN MGAKNHAIVM
301: PDANVDATLN ALVASGFGAA GQRCMALSTV VFVGGSKPWE DKLLERAKAL KVNAGTEPDT DLGPVISKQA KERIHRLVQS GVESGARLLL DGRNIVVPGY
401: ESGNFIGPTI LSDINANMEC YKEEIFGPVL LFMEADSLEE AINIINSNKY GNGASIFTTS GVAARKFQTE IEAGQVGINV PIPVPLPFFS FTGNKASFAG
501: DLNFYGKAGV NFYTQIKTIT QQWKDSTGGS RINLAMPTSQ K

Best Arabidopsis Sequence Match ( AT2G14170.1 )
(BLAST)

001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ

Arabidopsis Description

ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.