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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 8
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
 mitochondrion: 12746528
mitochondrion: 15276442
mitochondrion: 16429260
mitochondrion: 16443157
plastid: 17189339
mitochondrion: 19010998
extracellular: 21347307
mitochondrion: 23027867
plastid: 27992503
msms PMID: 15276442 doi
BK Kristensen, P Askerlund, NV Bykova, H Egsgaard, IM Møller
Risø National Laboratory, Plant Research Department, P.O. Box 49, DK-4000 Roskilde, Denmark.
msms PMID: 23027867 doi
G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID: 16443157 doi
IM Møller, BK Kristensen
Department of Agricultural Sciences, The Royal Veterinary and Agricultural University, Thorvaldsensvej 40, DK-1871 Frederiksberg C, Denmark.
msms PMID: 12746528 doi
JL Heazlewood, KA Howell, J Whelan, AH Millar
Plant Molecular Biology Group, School of Biomedical and Chemical Sciences, The University of Western Australia, Crawley 6009, Australia.
msms PMID: 16429260 doi
KA Howell, AH Millar, J Whelan
ARC Centre of Excellence in Plant Energy Biology, CMS Building M310, University of Western Australia, 35 Stirling Hwy, Perth, WA 6009, Australia.
msms PMID: 21347307 doi
L Zhou, SA Bokhari, CJ Dong, JY Liu
Laboratory of Molecular Biology, School of Life Sciences, Tsinghua University, Beijing, People's Republic of China.
msms PMID: 19010998 doi
S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 17189339 doi
T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky
Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G477900.1 Wheat mitochondrion 92.7 92.87
TraesCS2B01G501200.1 Wheat golgi, mitochondrion, unclear 92.7 92.7
TraesCS2D01G477100.2 Wheat golgi, mitochondrion 92.13 92.13
HORVU2Hr1G107520.1 Barley cytosol, peroxisome 54.87 91.85
EER95994 Sorghum mitochondrion 92.7 91.67
Zm00001d019054_P001 Maize mitochondrion 91.2 90.69
HORVU2Hr1G107550.1 Barley plasma membrane 92.51 85.17
GSMUA_Achr4P22360_001 Banana mitochondrion 80.34 79.74
VIT_03s0132g00200.t01 Wine grape mitochondrion 77.72 76.99
CDX81452 Canola mitochondrion 74.91 75.9
KRH42067 Soybean mitochondrion 76.78 75.79
KRH49851 Soybean mitochondrion 76.03 75.61
Bra037214.1-P Field mustard mitochondrion 74.53 75.52
CDY37216 Canola mitochondrion 74.34 75.33
KRH10621 Soybean cytosol 72.85 75.24
PGSC0003DMT400027691 Potato mitochondrion 75.47 75.05
AT2G14170.1 Thale cress mitochondrion 74.91 65.9
KRH21731 Soybean cytosol 38.2 65.38
VIT_03s0132g00230.t01 Wine grape cytosol 53.93 49.83
KRH45519 Soybean nucleus 64.23 34.2
Os01t0591000-01 Rice cytosol 27.34 29.08
Os01t0591300-01 Rice cytosol 27.15 28.6
VIT_00s0218g00070.t01 Wine grape cytosol 71.91 27.83
Os06t0270900-01 Rice mitochondrion 26.59 25.87
Os02t0730000-02 Rice mitochondrion 26.59 25.68
Os04t0464200-01 Rice peroxisome 23.97 25.35
Os08t0424500-01 Rice plastid 23.78 25.25
Os08t0440800-01 Rice extracellular, plasma membrane 22.85 24.45
Os09t0440300-01 Rice cytosol, mitochondrion, peroxisome, plastid 22.66 23.77
Os02t0173900-01 Rice mitochondrion 13.48 23.23
Os07t0688800-01 Rice plasma membrane 21.54 19.26
Os07t0689150-00 Rice endoplasmic reticulum 5.06 14.52
Protein Annotations
KEGG:00280+1.2.1.27KEGG:00640+1.2.1.27Gene3D:3.40.309.10Gene3D:3.40.605.10MapMan:4.2.7.6.3EntrezGene:4342610
EMBL:AK121280InterPro:Ald_DH/histidinol_DHInterPro:Ald_DH_CInterPro:Ald_DH_CS_CYSInterPro:Ald_DH_NInterPro:Aldehyde_DH_dom
ProteinID:BAC83916.1ProteinID:BAD31850.1ProteinID:BAF20996.1ProteinID:BAT00397.1GO:GO:0003674GO:GO:0003824
GO:GO:0004491GO:GO:0005488GO:GO:0005507GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0006950GO:GO:0006979GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0016620GO:GO:0055114InterPro:IPR016162InterPro:IPR016163InterPro:MeMal-semiAld_DH
EnsemblPlantsGene:Os07g0188800EnsemblPlants:Os07t0188800-01PFAM:PF00171ScanProsite:PS00070PANTHER:PTHR43866PANTHER:PTHR43866:SF5
UniProt:Q6Z4E4SUPFAM:SSF53720TIGRFAMs:TIGR01722UniParc:UPI00001BF4D2RefSeq:XP_015647227.1SEG:seg
Description
Similar to Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27). (Os07t0188800-01);Similar to Methylmalonate semi-aldehyde dehydrogenase. (Os07t0188800-02)
Coordinates
chr7:+:4734626..4741454
Molecular Weight (calculated)
57249.8 Da
IEP (calculated)
6.278
GRAVY (calculated)
-0.023
Length
534 amino acids
Sequence
(BLAST)
001: MLRAALLRSG SGLRRPPMAA PLSTAAAASW LSDSASSPPR VRLLIGGEFV ESRADEHVDV TNPATQEVVS RIPLTTADEF RAAVDAARTA FPGWRNTPVT
101: TRQRIMLKYQ ELIRANMDKL AENITTEQGK TLKDAWGDVF RGLEVVEHAC GMGTLQMGEY VSNVSNGIDT FSIREPLGVC AGICPFNFPA MIPLWMFPIA
201: VTCGNTFVLK PSEKDPGAAM MLAELAMEAG LPKGVLNIVH GTHDVVNNIC DDEDIKAVSF VGSNIAGMHI YSRASAKGKR VQSNMGAKNH AIILPDADRD
301: ATLNALIAAG FGAAGQRCMA LSTAVFVGGS EPWEDELVKR ASSLVVNSGM ASDADLGPVI SKQAKERICK LIQSGADNGA RVLLDGRDIV VPNFENGNFV
401: GPTLLADVKS EMECYKEEIF GPVLLLMKAE SLDDAIQIVN RNKYGNGASI FTTSGVSARK FQTDIEAGQV GINVPIPVPL PFFSFTGSKA SFAGDLNFYG
501: KAGVQFFTQI KTVTQQWKES PAQRVSLSMP TSQK
Best Arabidopsis Sequence Match ( AT2G14170.1 )
(BLAST)
001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ
Arabidopsis Description
ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.