Factsheet for Os08t0424500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
peroxisome 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050339_P001	Maize	extracellular	89.66	89.31
EES13852	Sorghum	peroxisome	89.46	89.11
Zm00001d032257_P001	Maize	extracellular	89.07	88.54
TraesCS6A01G371100.1	Wheat	golgi, nucleus, unclear	87.48	87.65
TraesCS6B01G408100.1	Wheat	mitochondrion	87.28	87.28
TraesCS6D01G355000.2	Wheat	golgi	87.08	87.08
HORVU6Hr1G087460.1	Barley	plastid	87.48	83.65
GSMUA_Achr9P16120_001	Banana	peroxisome	81.91	81.58
VIT_17s0000g07650.t01	Wine grape	peroxisome	77.73	77.73
AT1G74920.1	Thale cress	cytosol, peroxisome, plastid	76.14	76.45
Os04t0464200-01	Rice	peroxisome	76.34	76.04
Bra003781.1-P	Field mustard	plastid	75.55	75.85
CDX68159	Canola	plastid	75.35	75.65
CDX85862	Canola	cytosol, peroxisome, plastid	74.75	74.9
KRH57015	Soybean	endoplasmic reticulum	72.56	74.8
KRH54453	Soybean	endoplasmic reticulum	74.16	74.16
VIT_17s0000g07660.t01	Wine grape	cytosol	35.59	71.89
VIT_14s0066g02410.t01	Wine grape	cytosol, peroxisome, plastid	70.38	71.08
PGSC0003DMT400063205	Potato	cytosol, peroxisome, plastid	68.99	68.71
Solyc03g113800.2.1	Tomato	plastid	68.79	68.51
PGSC0003DMT400083025	Potato	cytosol	68.19	68.06
Solyc06g071290.2.1	Tomato	plastid	67.2	67.06
Os01t0591300-01	Rice	cytosol	42.15	41.81
Os01t0591000-01	Rice	cytosol	40.16	40.24
Os02t0730000-02	Rice	mitochondrion	40.76	37.07
Os06t0270900-01	Rice	mitochondrion	39.36	36.07
Os02t0173900-01	Rice	mitochondrion	19.28	31.29
Os08t0440800-01	Rice	extracellular, plasma membrane	28.83	29.06
Os09t0440300-01	Rice	cytosol, mitochondrion, peroxisome, plastid	26.84	26.52
Os07t0688800-01	Rice	plasma membrane	30.42	25.63
Os07t0188800-01	Rice	mitochondrion	25.25	23.78
Os07t0689150-00	Rice	endoplasmic reticulum	7.16	19.35

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	EntrezGene:4345606	MapMan:9.4.1.2	EMBL:AB096083	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	ProteinID:BAC98555.1
ProteinID:BAC99806.1	ProteinID:BAF23747.1	ProteinID:BAT05490.1	ProteinID:BAT05491.1	EMBL:DQ910546	ProteinID:EEE68710.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008802	GO:GO:0009058
GO:GO:0009628	GO:GO:0009987	GO:GO:0016491	GO:GO:0016620	GO:GO:0019285	GO:GO:0055114
GO:GO:0071454	InterPro:IPR016162	InterPro:IPR016163	EnsemblPlantsGene:Os08g0424500	EnsemblPlants:Os08t0424500-01	PFAM:PF00171
ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR43860	PANTHER:PTHR43860:SF3	UniProt:Q84LK3	SUPFAM:SSF53720
UniParc:UPI000019A399	RefSeq:XP_015650889.1	SEG:seg	:	:	:

Description

SCENTED KERNEL 2Betaine aldehyde dehydrogenase, Rice fragrance (Os08t0424500-01);Similar to Betaine aldehyde dehydrogenase. (Os08t0424500-02)

Coordinates

chr8:+:20379823..20385975

Molecular Weight (calculated)

54685.6 Da

IEP (calculated)

5.113

GRAVY (calculated)

-0.124

Length

503 amino acids

Sequence
(BLAST)

001: MATAIPQRQL FVAGEWRAPA LGRRLPVVNP ATESPIGEIP AGTAEDVDAA VAAAREALKR NRGRDWARAP GAVRAKYLRA IAAKIIERKS ELARLETLDC
101: GKPLDEAAWD MDDVAGCFEY FADLAESLDK RQNAPVSLPM ENFKCYLRKE PIGVVGLITP WNYPLLMATW KVAPALAAGC TAVLKPSELA SVTCLELADV
201: CKEVGLPSGV LNIVTGLGSE AGAPLSSHPG VDKVAFTGSY ETGKKIMASA APMVKPVSLE LGGKSPIVVF DDVDVEKAVE WTLFGCFWTN GQICSATSRL
301: ILHKKIAKEF QERMVAWAKN IKVSDPLEEG CRLGPVVSEG QYEKIKQFVS TAKSQGATIL TGGVRPKHLE KGFYIEPTII TDVDTSMQIW REEVFGPVLC
401: VKEFSTEEEA IELANDTHYG LAGAVLSGDR ERCQRLTEEI DAGIIWVNCS QPCFCQAPWG GNKRSGFGRE LGEGGIDNYL SVKQVTEYAS DEPWGWYKSP
501: SKL

Best Arabidopsis Sequence Match ( AT1G74920.1 )
(BLAST)

001: MAIPMPTRQL FIDGEWREPI LKKRIPIVNP ATEEVIGDIP AATTEDVDVA VNAARRALSR NKGKDWAKAP GAVRAKYLRA IAAKVNERKT DLAKLEALDC
101: GKPLDEAVWD MDDVAGCFEF YADLAEGLDA KQKAPVSLPM ESFKSYVLKQ PLGVVGLITP WNYPLLMAVW KVAPSLAAGC TAILKPSELA SVTCLELADI
201: CREVGLPPGV LNVLTGFGSE AGAPLASHPG VDKIAFTGSF ATGSKVMTAA AQLVKPVSME LGGKSPLIVF DDVDLDKAAE WALFGCFWTN GQICSATSRL
301: LVHESIASEF IEKLVKWSKN IKISDPMEEG CRLGPVVSKG QYEKILKFIS TAKSEGATIL HGGSRPEHLE KGFFIEPTII TDVTTSMQIW REEVFGPVLC
401: VKTFASEDEA IELANDSHYG LGAAVISNDT ERCDRISEAF EAGIVWINCS QPCFTQAPWG GVKRSGFGRE LGEWGLDNYL SVKQVTLYTS NDPWGWYKSP
501: N

Arabidopsis Description

ALDH10A8ALDH10A8 [Source:UniProtKB/TrEMBL;Acc:A0A178W4Y2]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.