CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68159	Canola	plastid	97.81	98.0
AT1G74920.1	Thale cress	cytosol, peroxisome, plastid	93.03	93.21
KRH57015	Soybean	endoplasmic reticulum	78.49	80.74
VIT_17s0000g07660.t01	Wine grape	cytosol	39.84	80.32
VIT_17s0000g07650.t01	Wine grape	peroxisome	80.28	80.12
CDX77890	Canola	mitochondrion, peroxisome	78.69	78.53
CDY21809	Canola	mitochondrion, peroxisome	78.69	78.53
KRH54453	Soybean	endoplasmic reticulum	78.29	78.13
GSMUA_Achr9P16120_001	Banana	peroxisome	77.89	77.43
Zm00001d032257_P001	Maize	extracellular	75.7	75.1
EES13852	Sorghum	peroxisome	75.3	74.85
Os08t0424500-01	Rice	plastid	74.9	74.75
Zm00001d050339_P001	Maize	extracellular	74.5	74.06
Os04t0464200-01	Rice	peroxisome	74.5	74.06
TraesCS6A01G371100.1	Wheat	golgi, nucleus, unclear	73.31	73.31
TraesCS6B01G408100.1	Wheat	mitochondrion	73.31	73.16
TraesCS6D01G355000.2	Wheat	golgi	73.11	72.96
KXG26485	Sorghum	peroxisome	73.51	72.92
TraesCS2D01G326900.1	Wheat	golgi, unclear	72.91	72.33
Zm00001d025626_P002	Maize	mitochondrion	72.71	72.13
HORVU2Hr1G080970.1	Barley	peroxisome	72.31	71.74
TraesCS2B01G346000.1	Wheat	mitochondrion	44.42	71.7
PGSC0003DMT400083025	Potato	cytosol	71.31	71.03
HORVU6Hr1G087460.1	Barley	plastid	73.71	70.34
Solyc06g071290.2.1	Tomato	plastid	70.32	70.04
PGSC0003DMT400063205	Potato	cytosol, peroxisome, plastid	69.92	69.5
Solyc03g113800.2.1	Tomato	plastid	69.72	69.31
TraesCS2A01G336000.1	Wheat	peroxisome	72.71	67.1
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	41.63	41.72
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	41.24	41.32
CDY21806	Canola	cytosol	38.05	38.51
CDY44985	Canola	mitochondrion	40.84	38.1
CDY36910	Canola	mitochondrion	40.64	37.85
CDY57318	Canola	mitochondrion	38.84	36.31
CDX91724	Canola	mitochondrion	38.84	36.31
CDY47634	Canola	mitochondrion	38.45	35.48
CDY61548	Canola	cytosol, peroxisome	38.25	34.59
CDX88542	Canola	mitochondrion	37.25	33.82
CDX87380	Canola	mitochondrion	36.85	33.51
CDY46134	Canola	peroxisome	20.72	32.5
CDY55249	Canola	cytosol	28.09	32.12
CDY20292	Canola	cytosol	31.67	31.61
CDX77883	Canola	mitochondrion	35.46	31.12
CDY34779	Canola	peroxisome	31.08	31.01
CDY51401	Canola	cytosol	12.15	27.73
CDY61473	Canola	cytosol, peroxisome, plastid	27.49	27.38
CDX81452	Canola	mitochondrion	28.49	27.13
CDY37216	Canola	mitochondrion	28.29	26.95
CDY02483	Canola	cytosol, peroxisome, plastid	27.49	26.85
CDY05285	Canola	vacuole	29.68	25.13
CDY24674	Canola	vacuole	29.68	25.08
CDY55250	Canola	nucleus	2.99	20.83

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:9.4.1.2	GO:A0A078D9T6	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlants:CDX85862	ProteinID:CDX85862
ProteinID:CDX85862.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00143654001	InterPro:IPR016162	InterPro:IPR016163	PFAM:PF00171
ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR43860	PANTHER:PTHR43860:SF3	SUPFAM:SSF53720	UniParc:UPI0004EB2B51

Description

BnaC06g22720D

Coordinates

chrLK031843:-:366744..370385

Molecular Weight (calculated)

54632.6 Da

IEP (calculated)

5.396

GRAVY (calculated)

-0.041

Length

502 amino acids

Sequence
(BLAST)

001: MAIPPVPARQ LFIDGEWREP ILKNRIPIVN PSTQDVIGHI PAATKEDVEV AVNAARRAFS RNKGKDWAKA PGALRAKYLR AIAAKVTERK SHLAKLESLD
101: SGKPLDETVW DMEDVAGCFE FYADLAEGLD AKQKAPVSLP MESFKSYVLK QPIGVVGLIT PWNYPLLMAV WKVAPSLAAG CTAVLKPSEL ASVTCLELAD
201: ICREVGLPPG VLNVLTGYGS EAGAPLAAHP SVDKIAFTGS FATGSKVMTA AAQLVKPVSM ELGGKSPLIV FDDVDLDKAA EWALFGCFWT NGQICSATSR
301: LLVHESIASE FIEKLVKWSK NIKISDPLEE GCRLGPVVSE GQYEKILKFI STAKSEGATI LHGGSRPEHL KKGFFIEPTI ITDVTTSMQI WREEVFGPVL
401: CVKTFSSEDE AIELANDSHY GLGAAVISND AERCDRVSQD FEAGIVWINC SQPCFTQAPW GGIKRSGFGR ELGEWGLDNY LSVKQVTLYT SNDPWGWYKP
501: PC

Best Arabidopsis Sequence Match ( AT1G74920.1 )
(BLAST)

001: MAIPMPTRQL FIDGEWREPI LKKRIPIVNP ATEEVIGDIP AATTEDVDVA VNAARRALSR NKGKDWAKAP GAVRAKYLRA IAAKVNERKT DLAKLEALDC
101: GKPLDEAVWD MDDVAGCFEF YADLAEGLDA KQKAPVSLPM ESFKSYVLKQ PLGVVGLITP WNYPLLMAVW KVAPSLAAGC TAILKPSELA SVTCLELADI
201: CREVGLPPGV LNVLTGFGSE AGAPLASHPG VDKIAFTGSF ATGSKVMTAA AQLVKPVSME LGGKSPLIVF DDVDLDKAAE WALFGCFWTN GQICSATSRL
301: LVHESIASEF IEKLVKWSKN IKISDPMEEG CRLGPVVSKG QYEKILKFIS TAKSEGATIL HGGSRPEHLE KGFFIEPTII TDVTTSMQIW REEVFGPVLC
401: VKTFASEDEA IELANDSHYG LGAAVISNDT ERCDRISEAF EAGIVWINCS QPCFTQAPWG GVKRSGFGRE LGEWGLDNYL SVKQVTLYTS NDPWGWYKSP
501: N

Arabidopsis Description

ALDH10A8ALDH10A8 [Source:UniProtKB/TrEMBL;Acc:A0A178W4Y2]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.