CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21806	Canola	cytosol	76.22	87.9
CDY36910	Canola	mitochondrion	81.12	86.09
CDY44985	Canola	mitochondrion	80.59	85.69
CDY57318	Canola	mitochondrion	63.64	67.78
CDX91724	Canola	mitochondrion	63.64	67.78
CDY47634	Canola	mitochondrion	63.81	67.1
CDY61548	Canola	cytosol, peroxisome	62.06	63.96
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	44.76	51.1
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	44.41	50.7
CDY21809	Canola	mitochondrion, peroxisome	33.92	38.57
CDX77890	Canola	mitochondrion, peroxisome	33.92	38.57
CDX68159	Canola	plastid	31.64	36.13
CDX85862	Canola	cytosol, peroxisome, plastid	31.12	35.46
CDX87380	Canola	mitochondrion	32.87	34.06
CDX88542	Canola	mitochondrion	32.87	34.0
CDY37216	Canola	mitochondrion	25.7	27.89
CDX81452	Canola	mitochondrion	25.52	27.7
CDY46134	Canola	peroxisome	15.04	26.88
CDY55249	Canola	cytosol	20.1	26.2
CDY20292	Canola	cytosol	22.55	25.65
CDY34779	Canola	peroxisome	22.38	25.45
CDY51401	Canola	cytosol	9.27	24.09
CDY61473	Canola	cytosol, peroxisome, plastid	20.28	23.02
CDY02483	Canola	cytosol, peroxisome, plastid	20.45	22.76
CDY05285	Canola	vacuole	21.68	20.91
CDY24674	Canola	vacuole	21.68	20.88
CDY55250	Canola	nucleus	2.1	16.67

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	GO:A0A078CRT7	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlants:CDX77883	ProteinID:CDX77883
ProteinID:CDX77883.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00129083001	InterPro:IPR016162	InterPro:IPR016163	PFAM:PF00171
ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF225	SUPFAM:SSF53720	UniParc:UPI0004EE4822
SEG:seg	:	:	:	:	:

Description

BnaC03g53360D

Coordinates

chrLK031813:-:1529341..1532515

Molecular Weight (calculated)

62631.0 Da

IEP (calculated)

8.641

GRAVY (calculated)

-0.085

Length

572 amino acids

Sequence
(BLAST)

001: MAARRVSSLL SRSFSTSSPF PFRSQGRNCY NASRVVRRFG ISSAAEKIIR PSVQVSYTQL LIDGNFVDAA SGKTFPTIDP RTGEVIADVA EGDAEDIDWA
101: VKAARKAFDE GPWPKMTAYE RSRIMLRFAD LVEKHSEDLA ALETWDNGKT YQQAKTAEIP MLARLFRYYA GWADKIHGLT VPADGNYHVQ TLHEPIGVAG
201: QINPWNFPLL MFAWKVGPAL ACGNTIVLKI AEQTPLTAFY AGKLFLEAGL PLGVLNIVSG FGPTAGASLL SHIDVDKLLL HCSFSSLAFT GSTDTGKVIL
301: GLAANSNLKP VTLELGGKSP FIVFEDANIN KAVELAHFAL FFNQGQCCCA GSRTYVHEKV YDEFVEKAKA RALKRVVGDP FKKGIEQGPQ IDSKQFEKVM
401: RYIRSGVESN ATLECGGHQI GNKGYFIQPT VFSNVKDDML IAQDEISVRR ADTNNIVDLV QHRLLNGGFV GVGFRELYAQ SFRITLASSV LPRLRANETR
501: YGLAAGVFTK SLDTANRVSR ALKAGTVWVN CFDVFDAAIP FGGYKMSGNS REKGIYLQSQ QLLADQGSCH CS

Best Arabidopsis Sequence Match ( AT3G48000.1 )
(BLAST)

001: MAARRVSSLL SRSFSASSPL LFRSQGRNCY NGGILRRFGT SSAAAEEIIN PSVQVSHTQL LINGNFVDSA SGKTFPTLDP RTGEVIAHVA EGDAEDINRA
101: VKAARTAFDE GPWPKMSAYE RSRVLLRFAD LVEKHSEELA SLETWDNGKP YQQSLTAEIP MFARLFRYYA GWADKIHGLT IPADGNYQVH TLHEPIGVAG
201: QIIPWNFPLL MFAWKVGPAL ACGNTIVLKT AEQTPLTAFY AGKLFLEAGL PPGVLNIVSG FGATAGAALA SHMDVDKLAF TGSTDTGKVI LGLAANSNLK
301: PVTLELGGKS PFIVFEDADI DKAVELAHFA LFFNQGQCCC AGSRTFVHEK VYDEFVEKSK ARALKRVVGD PFRKGIEQGP QIDLKQFEKV MKYIKSGIES
401: NATLECGGDQ IGDKGYFIQP TVFSNVKDDM LIAQDEIFGP VQSILKFSDV DEVIKRANET KYGLAAGVFT KNLDTANRVS RALKAGTVWV NCFDVFDAAI
501: PFGGYKMSGN GREKGIYSLN NYLQIKAVVT ALNKPAWI

Arabidopsis Description

ALDH2B4Aldehyde dehydrogenase family 2 member B4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SU63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.