CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46134	Canola	peroxisome	98.61	22.19
CDY20292	Canola	cytosol	98.61	14.12
CDY34779	Canola	peroxisome	97.22	13.92
CDY51401	Canola	cytosol	12.5	4.09
CDY57318	Canola	mitochondrion	27.78	3.72
CDX91724	Canola	mitochondrion	27.78	3.72
CDY47634	Canola	mitochondrion	27.78	3.68
CDY21806	Canola	cytosol	25.0	3.63
CDY61548	Canola	cytosol, peroxisome	27.78	3.6
CDY44985	Canola	mitochondrion	26.39	3.53
CDY36910	Canola	mitochondrion	26.39	3.53
CDX77890	Canola	mitochondrion, peroxisome	22.22	3.18
CDY21809	Canola	mitochondrion, peroxisome	22.22	3.18
CDX68159	Canola	plastid	20.83	2.99
CDX85862	Canola	cytosol, peroxisome, plastid	20.83	2.99
CDX87380	Canola	mitochondrion	22.22	2.9
CDX88542	Canola	mitochondrion	22.22	2.89
CDY05285	Canola	vacuole	22.22	2.7
CDY24674	Canola	vacuole	22.22	2.69
CDY37216	Canola	mitochondrion	19.44	2.66
CDX81452	Canola	mitochondrion	19.44	2.66
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	18.06	2.59
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	18.06	2.59
CDY61473	Canola	cytosol, peroxisome, plastid	16.67	2.38
CDY02483	Canola	cytosol, peroxisome, plastid	16.67	2.33
CDX77883	Canola	mitochondrion	16.67	2.1
CDY55249	Canola	cytosol	6.94	1.14

Protein Annotations

Gene3D:3.40.309.10	MapMan:35.1	GO:A0A078J088	UniProt:A0A078J088	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Aldehyde_DH_dom	EnsemblPlants:CDY55250	ProteinID:CDY55250	ProteinID:CDY55250.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00016593001
InterPro:IPR016163	PFAM:PF00171	PANTHER:PTHR42991	PANTHER:PTHR42991:SF3	SUPFAM:SSF53720	UniParc:UPI0004EE1EB9

Description

BnaC02g44980DBnaC02g44980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J088]

Coordinates

chrLK033387:+:31366..31876

Molecular Weight (calculated)

7643.2 Da

IEP (calculated)

7.541

GRAVY (calculated)

-0.111

Length

72 amino acids

Sequence
(BLAST)

1: MLISDAMETG TVQINSTPAR GPDHFPFQGL KDSGIGSQGV TNSINLMTKV KTTVINLPTP SYSMGDGFIS RL

Best Arabidopsis Sequence Match ( AT2G24270.4 )
(BLAST)

001: MAGTGLFAEI LDGEVYKYYA DGEWKTSSSG KSVAIMNPAT RKTQYKVQAC TQEEVNAVME LAKSAQKSWA KTPLWKRAEL LHKAAAILKD NKAPMAESLV
101: KEIAKPAKDS VTEVVRSGDL ISYCAEEGVR ILGEGKFLLS DSFPGNDRTK YCLTSKIPLG VVLAIPPFNY PVNLAVSKIA PALIAGNSLV LKPPTQGAVS
201: CLHMVHCFHL AGFPKGLISC ITGKGSEIGD FLTMHPAVNC ISFTGGDTGI SISKKAGMIP LQMELGGKDA CIVLDDADLD LVASNIIKGG FSYSGQRCTA
301: VKVVLVMESV ADELVEKVKA KVAKLTVGPP EENSDITAVV SESSANFIEG LVMDAKEKGA TFCQEYKREG NLIWPLLLDN VRPDMRIAWE EPFGPVVPVL
401: RINSVEEGIN HCNASNFGLQ GCVFTKDINK AILISDAMET GTVQINSAPA RGPDHFPFQG LKDSGIGSQG VTNSINLMTK VKTTVINLPT PSYSMGDGFI
501: SRL

Arabidopsis Description

ALDH11A3aldehyde dehydrogenase 11A3 [Source:TAIR;Acc:AT2G24270]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.