CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37216	Canola	mitochondrion	98.29	98.29
KRH10621	Soybean	cytosol	80.08	81.62
VIT_03s0132g00200.t01	Wine grape	mitochondrion	83.11	81.26
PGSC0003DMT400027691	Potato	mitochondrion	82.54	81.01
AT2G14170.1	Thale cress	mitochondrion	92.22	80.07
KRH49851	Soybean	mitochondrion	81.4	79.89
KRH42067	Soybean	mitochondrion	81.78	79.67
GSMUA_Achr4P22360_001	Banana	mitochondrion	77.99	76.39
Os07t0188800-01	Rice	mitochondrion	75.9	74.91
Zm00001d019054_P001	Maize	mitochondrion	76.28	74.86
HORVU2Hr1G107520.1	Barley	cytosol, peroxisome	45.16	74.61
EER95994	Sorghum	mitochondrion	76.28	74.44
TraesCS2A01G477900.1	Wheat	mitochondrion	74.38	73.55
TraesCS2B01G501200.1	Wheat	golgi, mitochondrion, unclear	74.38	73.41
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	74.0	73.03
KRH21731	Soybean	cytosol	41.37	69.87
HORVU2Hr1G107550.1	Barley	plasma membrane	73.43	66.72
VIT_03s0132g00230.t01	Wine grape	cytosol	57.5	52.42
CDY21806	Canola	cytosol	28.84	30.65
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	28.08	29.54
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	27.89	29.34
CDY36910	Canola	mitochondrion	29.79	29.13
CDY57318	Canola	mitochondrion	29.41	28.86
CDY44985	Canola	mitochondrion	29.41	28.81
CDX91724	Canola	mitochondrion	29.22	28.68
CDX68159	Canola	plastid	27.13	28.54
CDX85862	Canola	cytosol, peroxisome, plastid	27.13	28.49
CDY47634	Canola	mitochondrion	29.03	28.12
CDX77890	Canola	mitochondrion, peroxisome	26.76	28.03
CDY21809	Canola	mitochondrion, peroxisome	26.76	28.03
CDY61548	Canola	cytosol, peroxisome	29.03	27.57
CDX88542	Canola	mitochondrion	28.84	27.49
CDX87380	Canola	mitochondrion	28.65	27.36
CDX77883	Canola	mitochondrion	27.7	25.52
CDY55249	Canola	cytosol	20.87	25.06
CDY34779	Canola	peroxisome	23.72	24.85
CDY46134	Canola	peroxisome	14.99	24.69
CDY20292	Canola	cytosol	23.53	24.65
CDY61473	Canola	cytosol, peroxisome, plastid	22.96	24.01
CDY51401	Canola	cytosol	9.87	23.64
CDY02483	Canola	cytosol, peroxisome, plastid	22.77	23.35
CDY55250	Canola	nucleus	2.66	19.44
CDY05285	Canola	vacuole	21.25	18.89
CDY24674	Canola	vacuole	21.25	18.86

Protein Annotations

KEGG:00280+1.2.1.27	KEGG:00410+1.2.1.18	KEGG:00562+1.2.1.18	KEGG:00640+1.2.1.18+1.2.1.27	KEGG:00640+1.2.1.27	Gene3D:3.40.309.10
Gene3D:3.40.605.10	MapMan:4.2.7.6.3	GO:A0A078CXH3	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlants:CDX81452	ProteinID:CDX81452	ProteinID:CDX81452.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004491	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00135037001	InterPro:IPR016162	InterPro:IPR016163	InterPro:MeMal-semiAld_DH	PFAM:PF00171
ScanProsite:PS00070	PANTHER:PTHR43866	PANTHER:PTHR43866:SF5	MetaCyc:PWY-5642	MetaCyc:PWY-6373	SUPFAM:SSF53720
TIGRFAMs:TIGR01722	UniParc:UPI0004EDC171	SEG:seg	:	:	:

Description

BnaC09g08630D

Coordinates

chrLK031824:+:1895517..1899741

Molecular Weight (calculated)

56664.3 Da

IEP (calculated)

7.145

GRAVY (calculated)

-0.019

Length

527 amino acids

Sequence
(BLAST)

001: MLLRTSLHQG NNNLRPRFLR CLLSTMSSTQ PPRVPNLIGG SFVDSQASSH IDVINPATQE VVSQVPLTTN EEFKAAVSAA KQAFPSWRNT PITTRQRVML
101: KFQELIRKNM DKLALSITTE QGKTLKDAHG DIFRGLEVVE HACGMATLQM GEYVPNVSNG VDTYSLREPL GVCAGICPFN FPAMIPLWMF PIAVTCGNTF
201: VLKPSEKDPG ASVMLAELAM EAGLPNGVLN IVHGTNDTVN AICDDDDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGVVLPDA HVDATLNALL
301: AAGFGAAGQR CMALSTVVFV GNSKSWEDKL VERAKALKVS CGTEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR NIVVPGYEKG NFIGPTILSG
401: VTPDMECYKE EIFGPVLVCM EASSFDEAID ILNRNKYGNG AAIFTSSGAA ARKFQMEIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF
501: TQIKTVTQQW KDIPTSVSLA MPTSQKQ

Best Arabidopsis Sequence Match ( AT2G14170.1 )
(BLAST)

001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ

Arabidopsis Description

ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.