CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018090.1-P	Field mustard	mitochondrion	99.63	99.63
CDY44985	Canola	mitochondrion	98.89	99.07
CDY21806	Canola	cytosol	85.34	92.74
AT3G48000.1	Thale cress	mitochondrion	92.02	92.19
CDX77883	Canola	mitochondrion	86.09	81.12
CDY57318	Canola	mitochondrion	74.77	75.05
CDX91724	Canola	mitochondrion	74.77	75.05
CDY47634	Canola	mitochondrion	75.14	74.45
CDY61548	Canola	cytosol, peroxisome	73.28	71.17
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	50.83	54.69
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	50.46	54.29
CDY21809	Canola	mitochondrion, peroxisome	40.45	43.34
CDX77890	Canola	mitochondrion, peroxisome	40.26	43.14
CDX68159	Canola	plastid	38.03	40.92
CDX85862	Canola	cytosol, peroxisome, plastid	37.85	40.64
CDX87380	Canola	mitochondrion	37.11	36.23
CDX88542	Canola	mitochondrion	37.11	36.17
CDY46134	Canola	peroxisome	18.92	31.88
CDY37216	Canola	mitochondrion	29.31	29.98
CDX81452	Canola	mitochondrion	29.13	29.79
CDY20292	Canola	cytosol	27.09	29.03
CDY34779	Canola	peroxisome	26.53	28.43
CDY55249	Canola	cytosol	23.01	28.25
CDY61473	Canola	cytosol, peroxisome, plastid	24.86	26.59
CDY55250	Canola	nucleus	3.53	26.39
CDY51401	Canola	cytosol	10.76	26.36
CDY02483	Canola	cytosol, peroxisome, plastid	25.05	26.26
CDY05285	Canola	vacuole	26.72	24.28
CDY24674	Canola	vacuole	26.72	24.24

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	GO:A0A078HET1	UniProt:A0A078HET1	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlants:CDY36910
ProteinID:CDY36910	ProteinID:CDY36910.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00063045001	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF225	SUPFAM:SSF53720
UniParc:UPI0001CABC72	SEG:seg	:	:	:	:

Description

BnaA06g16950DBnaA06g16950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HET1]

Coordinates

chrLK032387:+:51909..54937

Molecular Weight (calculated)

58529.9 Da

IEP (calculated)

7.844

GRAVY (calculated)

-0.087

Length

539 amino acids

Sequence
(BLAST)

001: MAARSRVSSL LSRSFSASSP FLSRSQGKNL NNGSRIVRRF GTSSAAEEVI SPSVQVSYTK LLIDGNFVDA ASGKTFPTLD PRTGEVIAHV AEGDAEDINR
101: AVKAARKAFD EGPWPKMTAY ERSRVMLRFA DLVEKHSEEL AALESWDNGK TYEQALTAEI PMVARLFRYY AGWADKIHGL TVPADGNYHV QTLHEPIGVA
201: GQIIPWNFPL LMFAWKVGPA LACGNTIVLK TAEQTPLTAF YVGKLFLEAG LPPGVLNIVS GFGATAGASL ASHMDVDKLA FTGSTDTGKV ILGLAANSNL
301: KPVTLELGGK SPFIVFEDAD IDKAVELAHF ALFFNQGQCC CAGSRTYVHE KVYDEFVEKA KARALKRVVG DPFKKGIEQG PQIDSKQFEK VMKYIRSGVE
401: SNATLECGGG QVGDKGYFIQ PTVFSNVKDD MLIAQDEIFG PVQSILKFSD VDEVIKRAND TRYGLAAGVF TKSLDTANRV SRALKAGTVW VNCFDVFDAA
501: IPFGGYKMSG NGREKGIYSL NNYLQVKAVV TPLNNPAWI

Best Arabidopsis Sequence Match ( AT3G48000.1 )
(BLAST)

001: MAARRVSSLL SRSFSASSPL LFRSQGRNCY NGGILRRFGT SSAAAEEIIN PSVQVSHTQL LINGNFVDSA SGKTFPTLDP RTGEVIAHVA EGDAEDINRA
101: VKAARTAFDE GPWPKMSAYE RSRVLLRFAD LVEKHSEELA SLETWDNGKP YQQSLTAEIP MFARLFRYYA GWADKIHGLT IPADGNYQVH TLHEPIGVAG
201: QIIPWNFPLL MFAWKVGPAL ACGNTIVLKT AEQTPLTAFY AGKLFLEAGL PPGVLNIVSG FGATAGAALA SHMDVDKLAF TGSTDTGKVI LGLAANSNLK
301: PVTLELGGKS PFIVFEDADI DKAVELAHFA LFFNQGQCCC AGSRTFVHEK VYDEFVEKSK ARALKRVVGD PFRKGIEQGP QIDLKQFEKV MKYIKSGIES
401: NATLECGGDQ IGDKGYFIQP TVFSNVKDDM LIAQDEIFGP VQSILKFSDV DEVIKRANET KYGLAAGVFT KNLDTANRVS RALKAGTVWV NCFDVFDAAI
501: PFGGYKMSGN GREKGIYSLN NYLQIKAVVT ALNKPAWI

Arabidopsis Description

ALDH2B4Aldehyde dehydrogenase family 2 member B4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SU63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.