CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019522.1-P	Field mustard	mitochondrion	95.56	88.76
CDY36910	Canola	mitochondrion	92.74	85.34
CDY44985	Canola	mitochondrion	92.14	84.94
AT3G48000.1	Thale cress	mitochondrion	89.92	82.9
CDX77883	Canola	mitochondrion	87.9	76.22
CDY57318	Canola	mitochondrion	76.21	70.39
CDX91724	Canola	mitochondrion	75.81	70.02
CDY47634	Canola	mitochondrion	76.61	69.85
CDY61548	Canola	cytosol, peroxisome	75.81	67.75
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	54.23	53.69
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	53.83	53.29
CDY21809	Canola	mitochondrion, peroxisome	41.94	41.35
CDX77890	Canola	mitochondrion, peroxisome	41.73	41.15
CDX68159	Canola	plastid	39.11	38.72
CDX85862	Canola	cytosol, peroxisome, plastid	38.51	38.05
CDX88542	Canola	mitochondrion	38.71	34.72
CDX87380	Canola	mitochondrion	38.51	34.6
CDY46134	Canola	peroxisome	19.35	30.0
CDY37216	Canola	mitochondrion	31.05	29.22
CDX81452	Canola	mitochondrion	30.65	28.84
CDY20292	Canola	cytosol	27.22	26.84
CDY34779	Canola	peroxisome	26.81	26.44
CDY55249	Canola	cytosol	23.39	26.42
CDY51401	Canola	cytosol	11.29	25.45
CDY61473	Canola	cytosol, peroxisome, plastid	25.81	25.4
CDY02483	Canola	cytosol, peroxisome, plastid	26.01	25.1
CDY55250	Canola	nucleus	3.63	25.0
CDY05285	Canola	vacuole	26.61	22.26
CDY24674	Canola	vacuole	26.61	22.22

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	GO:A0A078G8U8	UniProt:A0A078G8U8	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlants:CDY21806
ProteinID:CDY21806	ProteinID:CDY21806.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00016352001	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF225	SUPFAM:SSF53720
UniParc:UPI0004EDDF6B	:	:	:	:	:

Description

BnaA06g20750DBnaA06g20750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8U8]

Coordinates

chrLK032124:-:414489..416783

Molecular Weight (calculated)

54412.0 Da

IEP (calculated)

7.249

GRAVY (calculated)

-0.134

Length

496 amino acids

Sequence
(BLAST)

001: MGNHWTARPF DTSTYTQLLI DGNFVDAASG KTFQTLDPRT GEVIADVAEG DAEDIDRAVK AARKAFDEGS WPRMTAYERS RIMLRFADLV EKHSEELAAL
101: ETWDNGKTYQ QAKTAEIPML ARLFRYYAGW ADKIHGLTVP ADGNYHVQTL HEPIGAAGQI IPWNFPLLMF AWKVGPALAC GNTIVLKTAE QTPLTAFYAG
201: KLFLEAGLPP GVLNIVSGFG PTAGASLASH MDVDKLAFTG STDTGKVILG LAANSNLKPV TLELGGKSPF IVFEDANINK AVELAHFALF FNQGQCCCAG
301: SRTYVHEKVY DEFVEKAKAR ALKRVVGDPF KKGIEQGPQI DSRQFEKVMR YIRSGVESNA TLECGGHQIG NKGYFIQPTV FSNVKDYMLI AQDEIFGPVQ
401: SILKFRDVDE VIKRANETRY GLAAGVFTKS LDTANRVSRA LKAGTVWVNC FDVFDAAIPF GGYKMSGNGR EKGIYSLNNY LQIKAVVTAL NNPAWI

Best Arabidopsis Sequence Match ( AT3G48000.1 )
(BLAST)

001: MAARRVSSLL SRSFSASSPL LFRSQGRNCY NGGILRRFGT SSAAAEEIIN PSVQVSHTQL LINGNFVDSA SGKTFPTLDP RTGEVIAHVA EGDAEDINRA
101: VKAARTAFDE GPWPKMSAYE RSRVLLRFAD LVEKHSEELA SLETWDNGKP YQQSLTAEIP MFARLFRYYA GWADKIHGLT IPADGNYQVH TLHEPIGVAG
201: QIIPWNFPLL MFAWKVGPAL ACGNTIVLKT AEQTPLTAFY AGKLFLEAGL PPGVLNIVSG FGATAGAALA SHMDVDKLAF TGSTDTGKVI LGLAANSNLK
301: PVTLELGGKS PFIVFEDADI DKAVELAHFA LFFNQGQCCC AGSRTFVHEK VYDEFVEKSK ARALKRVVGD PFRKGIEQGP QIDLKQFEKV MKYIKSGIES
401: NATLECGGDQ IGDKGYFIQP TVFSNVKDDM LIAQDEIFGP VQSILKFSDV DEVIKRANET KYGLAAGVFT KNLDTANRVS RALKAGTVWV NCFDVFDAAI
501: PFGGYKMSGN GREKGIYSLN NYLQIKAVVT ALNKPAWI

Arabidopsis Description

ALDH2B4Aldehyde dehydrogenase family 2 member B4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SU63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.