CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029596.1-P	Field mustard	vacuole	99.49	99.49
CDY24674	Canola	vacuole	99.16	98.99
AT3G66658.2	Thale cress	endoplasmic reticulum, extracellular, vacuole	97.13	96.64
VIT_05s0077g01060.t01	Wine grape	vacuole	81.96	81.96
Solyc12g099290.1.1	Tomato	plastid	79.6	79.6
EER99950	Sorghum	endoplasmic reticulum	79.6	79.6
GSMUA_Achr11P...	Banana	endoplasmic reticulum	79.26	79.12
PGSC0003DMT400011970	Potato	endoplasmic reticulum, extracellular, vacuole	79.09	79.09
KRH02344	Soybean	endoplasmic reticulum	79.43	79.03
KRH50740	Soybean	endoplasmic reticulum	79.26	78.73
KRH11951	Soybean	endoplasmic reticulum	78.41	77.89
KRH36977	Soybean	endoplasmic reticulum, extracellular, vacuole	76.39	77.57
Os07t0688800-01	Rice	plasma membrane	77.91	77.39
Zm00001d022554_P003	Maize	endoplasmic reticulum	78.08	77.3
GSMUA_Achr8P10590_001	Banana	endoplasmic reticulum	76.73	76.47
TraesCS2D01G094400.1	Wheat	golgi	76.56	76.43
TraesCS2A01G096000.1	Wheat	vacuole	76.22	76.09
HORVU2Hr1G016040.10	Barley	mitochondrion	72.85	73.34
TraesCS2B01G111400.2	Wheat	vacuole	76.39	70.02
Os07t0689150-00	Rice	endoplasmic reticulum	20.91	66.67
CDX68159	Canola	plastid	25.46	30.14
CDY46134	Canola	peroxisome	16.02	29.69
CDX85862	Canola	cytosol, peroxisome, plastid	25.13	29.68
CDY21809	Canola	mitochondrion, peroxisome	24.11	28.43
CDX77890	Canola	mitochondrion, peroxisome	23.95	28.23
CDY20292	Canola	cytosol	22.93	27.04
CDY34779	Canola	peroxisome	22.93	27.04
CDY57318	Canola	mitochondrion	24.45	27.0
CDY44985	Canola	mitochondrion	24.45	26.95
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	22.77	26.95
CDY55249	Canola	cytosol	19.9	26.88
CDX91724	Canola	mitochondrion	24.28	26.82
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	22.6	26.75
CDY36910	Canola	mitochondrion	24.28	26.72
CDY21806	Canola	cytosol	22.26	26.61
CDY47634	Canola	mitochondrion	23.61	25.74
CDX87380	Canola	mitochondrion	23.61	25.36
CDX88542	Canola	mitochondrion	23.44	25.14
CDY61548	Canola	cytosol, peroxisome	23.44	25.05
CDY55250	Canola	nucleus	2.7	22.22
CDX77883	Canola	mitochondrion	20.91	21.68
CDY37216	Canola	mitochondrion	19.06	21.44
CDY51401	Canola	cytosol	7.93	21.36
CDX81452	Canola	mitochondrion	18.89	21.25
CDY61473	Canola	cytosol, peroxisome, plastid	16.53	19.44
CDY02483	Canola	cytosol, peroxisome, plastid	16.69	19.26

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	GO:A0A078ETE3	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlants:CDY05285	ProteinID:CDY05285
ProteinID:CDY05285.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00120112001	InterPro:IPR016162	InterPro:IPR016163	PFAM:PF00171
ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF25	SUPFAM:SSF53720	TMHMM:TMhelix
UniParc:UPI0004EE5848	:	:	:	:	:

Description

BnaC05g45180D

Coordinates

chrLK031960:-:880159..883815

Molecular Weight (calculated)

65680.5 Da

IEP (calculated)

7.677

GRAVY (calculated)

0.029

Length

593 amino acids

Sequence
(BLAST)

001: MAFWWPLIVL AFAYGICRFL LMLIPPNVPS IDVDASDVLA HGKETEENSF IYIPPRGRSQ QSDKKVQCYE PATMKYLGYF PALSTSEVKE RVALSRKAQK
101: TWAQSSFKVR RQFLRILLKY IIEHQELICE VSSRDTGKTM VDASLGEIMT TCEKITWLLS EGERWLKPEH RSSGRAMLHK VSRVEFHPLG VIGAIVPWNY
201: PFHNIFNPML AAVFSGNGIV IKVSEHASWS GCFYFRIIQA ALAAVGAPEN LVDVITGFAE TGEALVSSVD KMIFVGSTAV GKMIMRNAAE TLTPVTLELG
301: GKDAFIICED ADVSHVAQVA VRGTLQSSGQ NCAGAERFYV HKDIYTAFIT QVTKIVKSVS AGPPLTGRYD MGAICLQEHS ETLQSLVNDA LDKGAEIAVR
401: GSFGHLGEDA VDQYFPPTVL INVNHTMKIM KEEAFGPIMP IMQFSTDEEV IKLANDSRYA LGCAVFSGSQ RRAKQIASQI QCGVAAINDF ASNYMCQSLP
501: FGGVKDSGFG RFAGIEGLRA CCLVKSVVED RFWPLIKTKI PKPIQAKNAF EFQEALVETL YGLNIWDRLR SLIDVLKFLT DQSSHVSRTR KSH

Best Arabidopsis Sequence Match ( AT3G66658.2 )
(BLAST)

001: MPFWWPLIVL AFAYAICKFL LMLIPPNVPS IDVDASDVLA HGKDTEENSF IYIPPRGRSQ QSDKKVQCYE PATMKYLGYF PALSPTEVEE RVTLSRKAQK
101: TWAQSSFKLR RQFLRILLKY IIEHQELICE VSSRDTGKTM VDASLGEIMT TCEKITWLLS EGERWLKPES RSSGRAMLHK VSRVEFHPLG VIGAIVPWNY
201: PFHNIFNPML AAVFSGNGIV IKVSEHASWS GCFYFRIIQA ALAAVGAPEN LVDVITGFAE TGEALVSSVD KMIFVGSTAV GKMIMRNAAE TLTPVTLELG
301: GKDAFIICED ADVSHVAQVA VRGTLQSSGQ NCAGAERFYV HKDIYTAFIG QVTKIVKSVS AGPPLTGRYD MGAICLQEHS EHLQSLVNDA LDKGAEIAVR
401: GSFGHLGEDA VDQYFPPTVL INVNHNMKIM KEEAFGPIMP IMQFSTDEEV IKLANDSRYA LGCAVFSGSK HRAKQIASQI QCGVAAINDF ASNYMCQSLP
501: FGGVKDSGFG RFAGIEGLRA CCLVKSVVED RFWPLIKTKI PKPIQYPVAE NAFEFQEALV ETLYGLNIWD RLRSLIDVLK FLTDQSSNVS RTRKSH

Arabidopsis Description

ALDH22A1Aldehyde dehydrogenase 22A1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WSF1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.