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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:golgi
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH36977 Soybean endoplasmic reticulum, extracellular, vacuole 94.81 96.92
KRH50740 Soybean endoplasmic reticulum 88.78 88.78
KRH02344 Soybean endoplasmic reticulum 88.44 88.59
VIT_05s0077g01060.t01 Wine grape vacuole 82.08 82.63
Solyc12g099290.1.1 Tomato plastid 79.9 80.44
PGSC0003DMT400011970 Potato endoplasmic reticulum, extracellular, vacuole 79.06 79.6
Bra029596.1-P Field mustard vacuole 78.22 78.75
AT3G66658.2 Thale cress endoplasmic reticulum, extracellular, vacuole 78.56 78.69
CDY24674 Canola vacuole 78.06 78.45
CDY05285 Canola vacuole 77.89 78.41
GSMUA_Achr11P... Banana endoplasmic reticulum 77.55 77.95
EER99950 Sorghum endoplasmic reticulum 77.39 77.91
Os07t0688800-01 Rice plasma membrane 77.89 77.89
TraesCS2D01G094400.1 Wheat golgi 76.21 76.6
GSMUA_Achr8P10590_001 Banana endoplasmic reticulum 76.21 76.47
TraesCS2A01G096000.1 Wheat vacuole 76.05 76.43
Zm00001d022554_P003 Maize endoplasmic reticulum 75.88 75.63
HORVU2Hr1G016040.10 Barley mitochondrion 72.53 73.51
TraesCS2B01G111400.2 Wheat vacuole 76.38 70.48
Os07t0689150-00 Rice endoplasmic reticulum 20.44 65.59
KRH54453 Soybean endoplasmic reticulum 25.13 29.82
KRH03318 Soybean mitochondrion 22.45 29.71
KRH39270 Soybean cytosol 24.46 29.14
KRH48410 Soybean cytosol 24.29 28.94
KRH57015 Soybean endoplasmic reticulum 23.62 28.89
KRH48414 Soybean peroxisome 9.55 28.79
KRH43670 Soybean mitochondrion 25.63 28.49
KRH13776 Soybean mitochondrion 25.63 28.49
KRG93347 Soybean peroxisome 24.96 28.22
KRH39268 Soybean nucleus 23.62 28.14
KRH48412 Soybean nucleus 23.45 27.94
KRH45689 Soybean nucleus 24.96 27.8
KRH39267 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 23.79 27.47
KRG99327 Soybean mitochondrion 24.62 27.43
KRH20324 Soybean mitochondrion 24.79 27.41
KRH03077 Soybean cytosol, nucleus 22.78 27.36
KRH05288 Soybean cytosol 22.61 27.22
KRH72280 Soybean cytosol, nucleus 22.61 27.16
KRH74615 Soybean mitochondrion 24.46 27.14
KRH69545 Soybean mitochondrion 24.46 27.09
KRH60293 Soybean nucleus 22.61 26.89
KRH41586 Soybean nucleus 22.45 26.75
KRH41589 Soybean nucleus 22.45 26.53
KRH54419 Soybean nucleus 23.62 26.11
KRH60295 Soybean mitochondrion, plastid 21.61 23.98
KRH63505 Soybean mitochondrion 16.92 22.75
KRH10621 Soybean cytosol 19.43 22.44
KRH21731 Soybean cytosol 11.73 22.44
KRH49851 Soybean mitochondrion 19.77 21.97
KRH12550 Soybean mitochondrion 18.59 21.85
KRH42067 Soybean mitochondrion 19.6 21.63
KRH37502 Soybean endoplasmic reticulum 18.43 21.61
KRH45519 Soybean nucleus 17.59 10.47
Protein Annotations
EntrezGene:100797873Gene3D:3.40.309.10Gene3D:3.40.605.10MapMan:35.1EMBL:ACUP02009256InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_CInterPro:Ald_DH_CS_CYSInterPro:Ald_DH_CS_GLUInterPro:Ald_DH_NInterPro:Aldehyde_DH_domEnsemblPlantsGene:GLYMA_15G140900
GO:GO:0003674GO:GO:0003824GO:GO:0004029GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0016620GO:GO:0055114UniProt:I1MGF2InterPro:IPR016162InterPro:IPR016163EnsemblPlants:KRH11951
ProteinID:KRH11951ProteinID:KRH11951.1PFAM:PF00171ScanProsite:PS00070ScanProsite:PS00687PANTHER:PTHR11699
PANTHER:PTHR11699:SF25SUPFAM:SSF53720SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI000233BCE2SEG:seg
Description
hypothetical protein
Coordinates
chr15:-:11538070..11545857
Molecular Weight (calculated)
65537.5 Da
IEP (calculated)
7.255
GRAVY (calculated)
0.079
Length
597 amino acids
Sequence
(BLAST)
001: MAFWWPLLVL ALAFAICKFL LILIPPKVPS IDVDASDVLD DGSLTQENSF IYVPPRGTAQ QSSGKVQCYE PATMKYLGYV PALTPDEVKE QVEKVRKAQK
101: MWAKTSFKKR RHFLRILLKY IIKHQALICE ISSRDTGKTM VDASLGEIMT TCEKINWLLS EGEQCLKPEY RSSGRAMLHK RSKVEFLPLG VIGAIVSWNY
201: PFHNIFNPML AAVFSGNGIV IKISEHASWS GCFYFRIIQS ALAAIGAPEE LVEVITGFAE TGEALVASAD KVIFVGSPGV GKMIMSNAAE TLIPVTLELG
301: GKDVFIVCED ADVDHVAQVA VRAALQSSGQ NCAGAERFYV HRNIYASFVS KVTKIIKSVT AGPPLAGKYD MGALCMHAHS EKLEALINDA LDKGAEIIAR
401: GSFGHIGEDA VDQYFPPTVI VNVNHSMRLM QEEAFGPIMP IMKFSSDEEV VRLANDSKYG LGCNVFSGSQ SRAREIASQI HCGLAAVNDF AATYMCQSLP
501: FGGVKNSGFG RFGGVEGLRA CCLVKSVVED RWWPFIKTVI PKPIQYPVAE NGFEFQESLV EALYGLSVWD RLQALVNVLK MLTEQNSTSG SRKKKND
Best Arabidopsis Sequence Match ( AT3G66658.2 )
(BLAST)
001: MPFWWPLIVL AFAYAICKFL LMLIPPNVPS IDVDASDVLA HGKDTEENSF IYIPPRGRSQ QSDKKVQCYE PATMKYLGYF PALSPTEVEE RVTLSRKAQK
101: TWAQSSFKLR RQFLRILLKY IIEHQELICE VSSRDTGKTM VDASLGEIMT TCEKITWLLS EGERWLKPES RSSGRAMLHK VSRVEFHPLG VIGAIVPWNY
201: PFHNIFNPML AAVFSGNGIV IKVSEHASWS GCFYFRIIQA ALAAVGAPEN LVDVITGFAE TGEALVSSVD KMIFVGSTAV GKMIMRNAAE TLTPVTLELG
301: GKDAFIICED ADVSHVAQVA VRGTLQSSGQ NCAGAERFYV HKDIYTAFIG QVTKIVKSVS AGPPLTGRYD MGAICLQEHS EHLQSLVNDA LDKGAEIAVR
401: GSFGHLGEDA VDQYFPPTVL INVNHNMKIM KEEAFGPIMP IMQFSTDEEV IKLANDSRYA LGCAVFSGSK HRAKQIASQI QCGVAAINDF ASNYMCQSLP
501: FGGVKDSGFG RFAGIEGLRA CCLVKSVVED RFWPLIKTKI PKPIQYPVAE NAFEFQEALV ETLYGLNIWD RLRSLIDVLK FLTDQSSNVS RTRKSH
Arabidopsis Description
ALDH22A1Aldehyde dehydrogenase 22A1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WSF1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.