CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60295	Soybean	mitochondrion, plastid	96.04	90.15
KRH48412	Soybean	nucleus	80.2	80.84
KRH39268	Soybean	nucleus	79.6	80.24
KRH41586	Soybean	nucleus	79.21	79.84
KRH60293	Soybean	nucleus	77.82	78.29
KRH48414	Soybean	peroxisome	30.1	76.77
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	77.03	75.24
KRH48410	Soybean	cytosol	73.86	74.45
KRH39270	Soybean	cytosol	73.27	73.85
PGSC0003DMT400000852	Potato	cytosol	69.7	70.4
Solyc12g007030.1.1	Tomato	cytosol	69.5	70.2
GSMUA_Achr6P04810_001	Banana	cytosol	59.21	69.53
Os01t0591000-01	Rice	cytosol	69.11	69.52
GSMUA_Achr5P24920_001	Banana	cytosol	68.91	69.05
TraesCS3A01G417200.1	Wheat	cytosol	68.12	68.8
AT3G24503.1	Thale cress	peroxisome	68.12	68.66
TraesCS3D01G412700.2	Wheat	golgi	67.72	68.4
KXG32803	Sorghum	cytosol	67.52	68.06
Bra001952.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	67.52	68.06
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	67.52	68.06
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	67.52	68.06
TraesCS3B01G452100.1	Wheat	golgi	67.33	68.0
TraesCS1D01G310100.1	Wheat	peroxisome	65.94	67.27
TraesCS1A01G310600.1	Wheat	peroxisome	65.94	67.14
HORVU1Hr1G068020.1	Barley	cytosol	66.34	67.13
TraesCS1B01G321900.1	Wheat	peroxisome	65.74	67.07
HORVU0Hr1G028680.4	Barley	peroxisome	55.84	66.98
HORVU0Hr1G031700.1	Barley	cytosol	66.14	66.93
TraesCS3A01G212300.1	Wheat	peroxisome	65.94	66.2
HORVU3Hr1G092680.2	Barley	mitochondrion, peroxisome, plastid	68.51	65.9
EES00989	Sorghum	cytosol	65.74	65.87
Zm00001d044340_P001	Maize	cytosol	65.94	65.17
Os01t0591300-01	Rice	cytosol	65.15	64.89
Zm00001d011259_P001	Maize	cytosol	64.55	63.67
TraesCS7B01G259100.1	Wheat	peroxisome	64.55	63.55
TraesCS7D01G353900.1	Wheat	peroxisome	64.75	63.5
KXG20268	Sorghum	cytosol	64.95	62.96
TraesCS7A01G369400.1	Wheat	unclear	63.56	62.33
TraesCS7B01G259200.1	Wheat	peroxisome	63.17	62.18
TraesCS7D01G354000.1	Wheat	peroxisome	62.97	61.99
Zm00001d036933_P001	Maize	cytosol	64.95	61.54
TraesCS7A01G369300.1	Wheat	peroxisome	64.55	58.63
HORVU7Hr1G085120.2	Barley	mitochondrion	64.36	58.24
KRH03318	Soybean	mitochondrion	49.11	54.99
Zm00001d044339_P003	Maize	cytosol, peroxisome, plasma membrane	62.38	54.03
KRH45689	Soybean	nucleus	56.04	52.8
KRG99327	Soybean	mitochondrion	55.84	52.61
KRH74615	Soybean	mitochondrion	55.45	52.04
KRH69545	Soybean	mitochondrion	55.45	51.95
KRH54419	Soybean	nucleus	54.26	50.74
KRH20324	Soybean	mitochondrion	53.86	50.37
KRG93347	Soybean	peroxisome	50.89	48.67
KRH63505	Soybean	mitochondrion	42.57	48.42
GSMUA_Achr3P26460_001	Banana	cytosol	67.92	43.81
KRH54453	Soybean	endoplasmic reticulum	42.57	42.74
KRH57015	Soybean	endoplasmic reticulum	39.6	40.98
KRH13776	Soybean	mitochondrion	35.05	32.96
KRH43670	Soybean	mitochondrion	34.46	32.4
KRH10621	Soybean	cytosol	30.5	29.79
KRH21731	Soybean	cytosol	18.22	29.49
KRH49851	Soybean	mitochondrion	30.69	28.86
KRH42067	Soybean	mitochondrion	30.69	28.65
KRH72280	Soybean	cytosol, nucleus	27.92	28.37
KRH03077	Soybean	cytosol, nucleus	27.92	28.37
KRH05288	Soybean	cytosol	27.13	27.62
KRH37502	Soybean	endoplasmic reticulum	26.93	26.72
KRH12550	Soybean	mitochondrion	26.34	26.18
KRH50740	Soybean	endoplasmic reticulum	26.93	22.78
KRH02344	Soybean	endoplasmic reticulum	26.53	22.48
KRH11951	Soybean	endoplasmic reticulum	26.53	22.45
KRH36977	Soybean	endoplasmic reticulum, extracellular, vacuole	25.54	22.09
KRH45519	Soybean	nucleus	30.89	15.55

Protein Annotations

EntrezGene:100779993	MapMan:21.5.1	Gene3D:3.40.309.10	Gene3D:3.40.605.10	EMBL:ACUP02004772	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlantsGene:GLYMA_08G039300	GO:GO:0003674
GO:GO:0003824	GO:GO:0004029	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0055114	UniProt:I1KQ30	InterPro:IPR016162	InterPro:IPR016163	EnsemblPlants:KRH41589	ProteinID:KRH41589
ProteinID:KRH41589.1	PFAM:PF00171	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF182	SUPFAM:SSF53720
UniParc:UPI0002337DB6	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:3072925..3078018

Molecular Weight (calculated)

54840.0 Da

IEP (calculated)

5.886

GRAVY (calculated)

-0.023

Length

505 amino acids

Sequence
(BLAST)

001: MSSLSNNSSS SHGNSFLQMP PIKFTKLFIN GDFVDSLSGR TFETIDPRTE EVIARVSEGD KEDIDIAVKA ARQAFDSGPW PRLPASERAK IMMKWADLID
101: ENIEELAALD TVDAGKLNYI NKVVEIPSAT NALRYYAGAA DKIHGEVLKM NGDFHAYTLL EPIGVVGHII PWNAPSLSFF IKVSPSLAAG CTMVLKPAEQ
201: TPLSALFYAH LAKLAGIPDG VLNIVPGFGP TAGAAISSHM DIDVVSFTGS IEVGREVMQA AARSNLKPVS LELGGKSPLI IFNDADIDKA AQLALFGIMS
301: NKGEICVASS RVFVQEEIYD EFEKKLVEKA KSWVVGDPFD PKSLQGPQAD RNQLEKILSY IEHGKREGAT LLTGGNTVGN KGYYIEPTIF CNVKEDMLIA
401: RDEIFGPVLA LMKFKTMEEA IKSANNTKYG LAAGIVTKNL DTANTMSRSI RAGIVWINCY LTVGSDVPFG GYKMSGFGRD LGLQALHKYL QVKSVVTPIH
501: NSPWL

Best Arabidopsis Sequence Match ( AT1G23800.1 )
(BLAST)

001: MASRRVSSLL SRSFMSSSRS IFSLRGMNRG AQRYSNLAAA VENTITPPVK VEHTQLLIGG RFVDAVSGKT FPTLDPRNGE VIAQVSEGDA EDVNRAVAAA
101: RKAFDEGPWP KMTAYERSKI LFRFADLIEK HNDEIAALET WDNGKPYEQS AQIEVPMLAR VFRYYAGWAD KIHGMTMPGD GPHHVQTLHE PIGVAGQIIP
201: WNFPLLMLSW KLGPALACGN TVVLKTAEQT PLSALLVGKL LHEAGLPDGV VNIVSGFGAT AGAAIASHMD VDKVAFTGST DVGKIILELA SKSNLKAVTL
301: ELGGKSPFIV CEDADVDQAV ELAHFALFFN QGQCCCAGSR TFVHERVYDE FVEKAKARAL KRNVGDPFKS GIEQGPQVDS EQFNKILKYI KHGVEAGATL
401: QAGGDRLGSK GYYIQPTVFS DVKDDMLIAT DEIFGPVQTI LKFKDLDEVI ARANNSRYGL AAGVFTQNLD TAHRLMRALR VGTVWINCFD VLDASIPFGG
501: YKMSGIGREK GIYSLNNYLQ VKAVVTSLKN PAWL

Arabidopsis Description

ALDH2B7Aldehyde dehydrogenase family 2 member B7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8S528]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.