CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

nucleus: 21132161
mitochondrion: 27780359

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74615	Soybean	mitochondrion	98.14	98.33
KRH45689	Soybean	nucleus	87.2	87.69
KRG99327	Soybean	mitochondrion	87.01	87.5
KRH03318	Soybean	mitochondrion	69.39	82.93
VIT_01s0137g00080.t01	Wine grape	cytosol	58.44	79.55
Solyc05g005700.2.1	Tomato	mitochondrion, unclear	77.92	79.4
PGSC0003DMT400010555	Potato	mitochondrion	77.92	79.4
AT1G23800.1	Thale cress	mitochondrion	78.48	79.21
CDY57318	Canola	mitochondrion	78.66	78.96
Bra016330.1-P	Field mustard	mitochondrion	78.48	78.77
GSMUA_Achr3P06170_001	Banana	mitochondrion	77.74	78.76
Bra024619.1-P	Field mustard	mitochondrion	77.92	78.36
CDX91724	Canola	mitochondrion	77.92	78.21
VIT_01s0026g00220.t01	Wine grape	mitochondrion	79.04	78.17
Solyc08g068190.2.1	Tomato	nucleus, unclear	77.37	78.09
GSMUA_Achr5P05290_001	Banana	mitochondrion	77.92	77.49
CDY47634	Canola	mitochondrion	78.11	77.39
TraesCS7A01G210100.1	Wheat	mitochondrion	78.66	77.23
TraesCS7D01G211900.1	Wheat	mitochondrion	78.48	77.05
Os06t0270900-01	Rice	mitochondrion	78.29	76.87
HORVU7Hr1G042880.1	Barley	mitochondrion	78.29	76.87
KRH54419	Soybean	nucleus	76.99	76.85
TraesCS7B01G116800.1	Wheat	mitochondrion	78.48	76.63
KXG19772	Sorghum	mitochondrion	78.85	76.44
KRH20324	Soybean	mitochondrion	76.25	76.11
HORVU6Hr1G072830.2	Barley	peroxisome	71.61	75.24
PGSC0003DMT400010556	Potato	plastid	33.21	74.58
CDY61548	Canola	cytosol, peroxisome	76.25	74.05
KRG93347	Soybean	peroxisome	72.17	73.67
KXG30827	Sorghum	mitochondrion, plastid	74.03	72.41
TraesCS6D01G272400.1	Wheat	mitochondrion	72.91	72.11
Os02t0730000-02	Rice	mitochondrion	73.65	71.79
TraesCS6B01G321400.1	Wheat	mitochondrion	56.96	71.56
KRH63505	Soybean	mitochondrion	58.07	70.5
Zm00001d045706_P001	Maize	mitochondrion	76.62	70.48
PGSC0003DMT400037582	Potato	mitochondrion	76.44	69.36
Zm00001d051754_P003	Maize	cytosol	74.21	69.08
VIT_01s0026g00210.t01	Wine grape	cytosol	66.05	60.65
KRH48414	Soybean	peroxisome	21.15	57.58
KRH39268	Soybean	nucleus	52.32	56.29
KRH48412	Soybean	nucleus	52.32	56.29
KRH41589	Soybean	nucleus	51.95	55.45
KRH41586	Soybean	nucleus	50.83	54.69
KRH60293	Soybean	nucleus	50.65	54.38
KRH39267	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	51.95	54.16
KRH48410	Soybean	cytosol	49.35	53.09
KRH39270	Soybean	cytosol	49.17	52.89
KRH60295	Soybean	mitochondrion, plastid	51.95	52.04
KRH54453	Soybean	endoplasmic reticulum	36.92	39.56
KRH57015	Soybean	endoplasmic reticulum	35.81	39.55
KRH43670	Soybean	mitochondrion	36.73	36.87
KRH13776	Soybean	mitochondrion	36.55	36.69
KRH10621	Soybean	cytosol	28.39	29.59
KRH72280	Soybean	cytosol, nucleus	27.27	29.58
KRH03077	Soybean	cytosol, nucleus	27.09	29.38
KRH21731	Soybean	cytosol	16.7	28.85
KRH49851	Soybean	mitochondrion	28.39	28.49
KRH42067	Soybean	mitochondrion	28.57	28.47
KRH05288	Soybean	cytosol	26.16	28.43
KRH12550	Soybean	mitochondrion	25.23	26.77
KRH37502	Soybean	endoplasmic reticulum	25.23	26.72
KRH50740	Soybean	endoplasmic reticulum	27.27	24.62
KRH02344	Soybean	endoplasmic reticulum	27.09	24.5
KRH11951	Soybean	endoplasmic reticulum	27.09	24.46
KRH36977	Soybean	endoplasmic reticulum, extracellular, vacuole	26.16	24.14
KRH45519	Soybean	nucleus	28.01	15.05

Protein Annotations

EntrezGene:100782019	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	EMBL:ACUP02000721	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlantsGene:GLYMA_02G034000
GO:GO:0003674	GO:GO:0003824	GO:GO:0004029	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016620	GO:GO:0055114	UniProt:I1JC17	InterPro:IPR016162	InterPro:IPR016163	EnsemblPlants:KRH69545
ProteinID:KRH69545	ProteinID:KRH69545.1	PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699
PANTHER:PTHR11699:SF225	SUPFAM:SSF53720	UniParc:UPI000233757B	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:3157712..3162381

Molecular Weight (calculated)

58556.0 Da

IEP (calculated)

6.952

GRAVY (calculated)

-0.104

Length

539 amino acids

Sequence
(BLAST)

001: MASSLRISRL LSRSFLSAST TTPLFSRGGS GALGAGLSKF STAAAIEEPI KPPLKVEHTQ LLIDGKFVDA ATGKTFPTLD PRTGDVISHV AEGDHEDVDR
101: AVAAARKAFD RGPWPKMTAY ERQRILLRAA DLFEKHNDDL AALETWDNGK PYEQSAQIEI PMLVRLFRYY AGWADKIHGL TVPADGPYHV QTLHEPIGVA
201: GQIIPWNFPL VMFAWKVGPA LACGNTIVLK TAEQTPLSAL YASKLLHEAG LPPGVLNIIS GFGPTAGAAI ASHMDIDKLA FTGSTETGKI VLELAARSNL
301: KPVTLELGGK SPFIVCEDAD VDEAVELAHF ALFFNQGQCC CAGSRTFVHE RVYDEFIEKA KARALKRAVG DPFKGGIEQG PQIDSEQFQK ILKYIRSGVE
401: SGATLETGGD RFGNSGFYIQ PTVFSNVKDD MLIAKEEIFG PVQSILKFKD LDDVIQRANN THYGLAAGVF TKNINTANTL TRALRAGTVW VNCFDTFDAA
501: IPFGGYKMSG QGREKGEYSL KNYLQVKAVV TSLKNPAWL

Best Arabidopsis Sequence Match ( AT1G23800.1 )
(BLAST)

001: MASRRVSSLL SRSFMSSSRS IFSLRGMNRG AQRYSNLAAA VENTITPPVK VEHTQLLIGG RFVDAVSGKT FPTLDPRNGE VIAQVSEGDA EDVNRAVAAA
101: RKAFDEGPWP KMTAYERSKI LFRFADLIEK HNDEIAALET WDNGKPYEQS AQIEVPMLAR VFRYYAGWAD KIHGMTMPGD GPHHVQTLHE PIGVAGQIIP
201: WNFPLLMLSW KLGPALACGN TVVLKTAEQT PLSALLVGKL LHEAGLPDGV VNIVSGFGAT AGAAIASHMD VDKVAFTGST DVGKIILELA SKSNLKAVTL
301: ELGGKSPFIV CEDADVDQAV ELAHFALFFN QGQCCCAGSR TFVHERVYDE FVEKAKARAL KRNVGDPFKS GIEQGPQVDS EQFNKILKYI KHGVEAGATL
401: QAGGDRLGSK GYYIQPTVFS DVKDDMLIAT DEIFGPVQTI LKFKDLDEVI ARANNSRYGL AAGVFTQNLD TAHRLMRALR VGTVWINCFD VLDASIPFGG
501: YKMSGIGREK GIYSLNNYLQ VKAVVTSLKN PAWL

Arabidopsis Description

ALDH2B7Aldehyde dehydrogenase family 2 member B7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8S528]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.