Factsheet for PGSC0003DMT400010555

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

mitochondrion: 14983062

msms PMID: 14983062 doi

Y Balmer, WH Vensel, CK Tanaka, WJ Hurkman, E Gelhaye, N Rouhier, JP Jacquot, W Manieri, P Schürmann, M Droux, BB Buchanan

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g005700.2.1	Tomato	mitochondrion, unclear	98.11	98.11
PGSC0003DMT400010556	Potato	plastid	38.75	85.42
KRG99327	Soybean	mitochondrion	80.72	79.66
KRH45689	Soybean	nucleus	80.15	79.1
KRH74615	Soybean	mitochondrion	79.58	78.25
KRH69545	Soybean	mitochondrion	79.4	77.92
PGSC0003DMT400062930	Potato	cytosol	78.45	77.57
CDY57318	Canola	mitochondrion	78.45	77.28
Bra016330.1-P	Field mustard	mitochondrion	78.07	76.91
CDX91724	Canola	mitochondrion	77.88	76.72
AT1G23800.1	Thale cress	mitochondrion	77.32	76.59
Bra024619.1-P	Field mustard	mitochondrion	76.75	75.75
VIT_01s0026g00220.t01	Wine grape	mitochondrion	77.69	75.41
VIT_01s0137g00080.t01	Wine grape	cytosol	56.33	75.25
GSMUA_Achr3P06170_001	Banana	mitochondrion	75.61	75.19
HORVU6Hr1G072830.2	Barley	peroxisome	72.78	75.05
CDY47634	Canola	mitochondrion	76.75	74.63
TraesCS7A01G210100.1	Wheat	mitochondrion	77.32	74.5
TraesCS7D01G211900.1	Wheat	mitochondrion	77.13	74.32
KXG19772	Sorghum	mitochondrion	77.88	74.1
HORVU7Hr1G042880.1	Barley	mitochondrion	76.75	73.95
TraesCS7B01G116800.1	Wheat	mitochondrion	76.94	73.73
GSMUA_Achr5P05290_001	Banana	mitochondrion	75.43	73.62
Os06t0270900-01	Rice	mitochondrion	75.99	73.22
CDY61548	Canola	cytosol, peroxisome	75.8	72.25
PGSC0003DMT400037582	Potato	mitochondrion	80.72	71.89
TraesCS6D01G272400.1	Wheat	mitochondrion	73.72	71.56
KXG30827	Sorghum	mitochondrion, plastid	74.1	71.14
TraesCS6B01G321400.1	Wheat	mitochondrion	57.28	70.63
Os02t0730000-02	Rice	mitochondrion	73.16	69.98
Zm00001d045706_P001	Maize	mitochondrion	75.8	68.43
Zm00001d051754_P003	Maize	cytosol	73.35	67.01
VIT_01s0026g00210.t01	Wine grape	cytosol	67.49	60.82
PGSC0003DMT400000852	Potato	cytosol	50.85	53.8
PGSC0003DMT400063205	Potato	cytosol, peroxisome, plastid	36.86	38.61
PGSC0003DMT400083025	Potato	cytosol	35.16	36.9
PGSC0003DMT400044163	Potato	plastid	34.97	36.06
PGSC0003DMT400028915	Potato	cytosol	27.22	29.03
PGSC0003DMT400027691	Potato	mitochondrion	28.54	28.12
PGSC0003DMT400058895	Potato	cytosol	25.14	26.13
PGSC0003DMT400011970	Potato	endoplasmic reticulum, extracellular, vacuole	28.36	25.3

Protein Annotations

EntrezGene:102588058	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162
InterPro:IPR016163	UniProt:M0ZY90	PFAM:PF00171	EnsemblPlantsGene:PGSC0003DMG401004125	PGSC:PGSC0003DMG401004125	EnsemblPlants:PGSC0003DMT400010555
ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF225	SUPFAM:SSF53720	UniParc:UPI000294E65A
RefSeq:XP_006355977.1	:	:	:	:	:

Description

Aldehyde dehydrogenase (NAD+) [Source:PGSC_GENE;Acc:PGSC0003DMG401004125]

Coordinates

chr5:+:7767911..7772402

Molecular Weight (calculated)

57923.5 Da

IEP (calculated)

8.116

GRAVY (calculated)

-0.145

Length

529 amino acids

Sequence
(BLAST)

001: MAARVFLSRS VHLLSKGKRS HLGRIAAYKY STAAALEEPI KPTVNVDHTK LFINGQFVDS ASGKTFPTLD PRTGEVIAHI AEGDAEDINR AVAAARKAFD
101: EGPWPRMTAY ERSKILLRLA DLIEKHNDQI ATLETWDTGK PYAQAAKIEV PMVVRLLRYY AGWADKIHGM TIPADGPYHV QTLHEPIGVA GQIIPWNFPL
201: LMFSWKIGPA LACGNTIVLK TAEQTPLSAL YVANLLQEAG LPEGVLNIIS GFGATAGASL CSHMDVDKLA FTGSTETGKT ILELAAKSNL KPVTLELGGK
301: SPFIVYEDAD IDTAVEQAHF ALFFNQGQCC CAGSRTYVHE KVYDEFLEKA KARALKRVVG DPFKSGTEQG PQIDSKQFDK IMKYIRSGVD SGATLETGGE
401: QFGKKGYYIK PTVFSNVKDD MLIAQDEIFG PVQSILKFKD LDEVVRRANS SRYGLAAGVF SQNIDTANTL ARALRVGTVW INCFDTFDAT IPFGGYKMSG
501: QGREKGEYGL RNYLQVKAVV TPLKNPAWL

Best Arabidopsis Sequence Match ( AT1G23800.1 )
(BLAST)

001: MASRRVSSLL SRSFMSSSRS IFSLRGMNRG AQRYSNLAAA VENTITPPVK VEHTQLLIGG RFVDAVSGKT FPTLDPRNGE VIAQVSEGDA EDVNRAVAAA
101: RKAFDEGPWP KMTAYERSKI LFRFADLIEK HNDEIAALET WDNGKPYEQS AQIEVPMLAR VFRYYAGWAD KIHGMTMPGD GPHHVQTLHE PIGVAGQIIP
201: WNFPLLMLSW KLGPALACGN TVVLKTAEQT PLSALLVGKL LHEAGLPDGV VNIVSGFGAT AGAAIASHMD VDKVAFTGST DVGKIILELA SKSNLKAVTL
301: ELGGKSPFIV CEDADVDQAV ELAHFALFFN QGQCCCAGSR TFVHERVYDE FVEKAKARAL KRNVGDPFKS GIEQGPQVDS EQFNKILKYI KHGVEAGATL
401: QAGGDRLGSK GYYIQPTVFS DVKDDMLIAT DEIFGPVQTI LKFKDLDEVI ARANNSRYGL AAGVFTQNLD TAHRLMRALR VGTVWINCFD VLDASIPFGG
501: YKMSGIGREK GIYSLNNYLQ VKAVVTSLKN PAWL

Arabidopsis Description

ALDH2B7Aldehyde dehydrogenase family 2 member B7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8S528]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.