Factsheet for Solyc05g005700.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, unclear

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

unclear: 26455813

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010555	Potato	mitochondrion	98.11	98.11
PGSC0003DMT400010556	Potato	plastid	38.75	85.42
KRG99327	Soybean	mitochondrion	81.47	80.41
Solyc08g068190.2.1	Tomato	nucleus, unclear	81.1	80.34
KRH45689	Soybean	nucleus	80.53	79.48
KRH74615	Soybean	mitochondrion	79.58	78.25
KRH69545	Soybean	mitochondrion	79.4	77.92
CDY57318	Canola	mitochondrion	77.88	76.72
Solyc02g086970.2.1	Tomato	cytosol	68.43	76.53
Solyc03g114150.2.1	Tomato	plastid	77.32	76.45
Bra016330.1-P	Field mustard	mitochondrion	77.5	76.35
AT1G23800.1	Thale cress	mitochondrion	76.94	76.22
CDX91724	Canola	mitochondrion	77.32	76.16
VIT_01s0026g00220.t01	Wine grape	mitochondrion	77.69	75.41
GSMUA_Achr3P06170_001	Banana	mitochondrion	75.8	75.38
Bra024619.1-P	Field mustard	mitochondrion	76.37	75.37
VIT_01s0137g00080.t01	Wine grape	cytosol	56.33	75.25
HORVU6Hr1G072830.2	Barley	peroxisome	72.59	74.85
TraesCS7A01G210100.1	Wheat	mitochondrion	77.13	74.32
CDY47634	Canola	mitochondrion	76.37	74.26
TraesCS7D01G211900.1	Wheat	mitochondrion	76.94	74.13
KXG19772	Sorghum	mitochondrion	77.69	73.92
GSMUA_Achr5P05290_001	Banana	mitochondrion	75.61	73.8
HORVU7Hr1G042880.1	Barley	mitochondrion	76.56	73.77
TraesCS7B01G116800.1	Wheat	mitochondrion	76.75	73.55
Os06t0270900-01	Rice	mitochondrion	75.8	73.04
CDY61548	Canola	cytosol, peroxisome	75.43	71.89
TraesCS6D01G272400.1	Wheat	mitochondrion	73.53	71.38
KXG30827	Sorghum	mitochondrion, plastid	73.35	70.42
TraesCS6B01G321400.1	Wheat	mitochondrion	57.09	70.4
Os02t0730000-02	Rice	mitochondrion	72.78	69.62
Zm00001d045706_P001	Maize	mitochondrion	75.61	68.26
Zm00001d051754_P003	Maize	cytosol	72.59	66.32
VIT_01s0026g00210.t01	Wine grape	cytosol	67.49	60.82
Solyc12g007030.1.1	Tomato	cytosol	50.85	53.8
Solyc03g113800.2.1	Tomato	plastid	36.67	38.42
Solyc06g071290.2.1	Tomato	plastid	35.35	37.1
Solyc09g090700.1.1	Tomato	plastid	34.97	35.44
Solyc07g005390.2.1	Tomato	cytosol, extracellular, nucleus, plastid	27.41	29.23
Solyc03g122310.2.1	Tomato	nucleus	25.9	25.8
Solyc12g099290.1.1	Tomato	plastid	28.17	25.13

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004029
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162
InterPro:IPR016163	UniProt:K4BW98	PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699
PANTHER:PTHR11699:SF225	SUPFAM:SSF53720	EnsemblPlantsGene:Solyc05g005700.2	EnsemblPlants:Solyc05g005700.2.1	UniParc:UPI0002766FEF	:

Description

No Description!

Coordinates

chr5:-:514498..518886

Molecular Weight (calculated)

57844.4 Da

IEP (calculated)

8.056

GRAVY (calculated)

-0.142

Length

529 amino acids

Sequence
(BLAST)

001: MAARVFLSRS VHLLSKGKRS HLGKIAAYKY STAAAFEEPV KPTVNVDHTK LLINGQFVDS ASGKTFPTLD PRTGEVIAHI AEGDAEDINR AVAAARKAFD
101: EGPWPRMTAY ERSKILLRLA DLIEKHNDQI ATLETWDTGK PYAQAAKIEV PMVVRLLRYY AGWADKIHGM TIPADGPYHV QTLHEPIGVA GQIIPWNFPL
201: LMFSWKIGPA LACGNTIVLK TAEQTPLSAL YVASLFQEAG LPEGVLNIIS GYGATAGASL CSHMDVDKLA FTGSTETGKT ILELAAKSNL KPVTLELGGK
301: SPFIVCEDAD IDTAVEQAHF ALFFNQGQCC CAGSRTYVHE KVYDEFLEKA KARALKRVVG DPFKSGTEQG PQIDSKQFDK IMKYIRSGVD SGATLETGGE
401: QFGKKGYYIR PTVFSNVKDD MLIAQDEIFG PVQSILKFKD LDEVVRRANS SRYGLAAGVF SQNIDTANTL ARALRVGTVW INCFDTFDAT IPFGGYKMSG
501: QGREKGEYGL KNYLQVKAVV TPLKNPAWL

Best Arabidopsis Sequence Match ( AT1G23800.1 )
(BLAST)

001: MASRRVSSLL SRSFMSSSRS IFSLRGMNRG AQRYSNLAAA VENTITPPVK VEHTQLLIGG RFVDAVSGKT FPTLDPRNGE VIAQVSEGDA EDVNRAVAAA
101: RKAFDEGPWP KMTAYERSKI LFRFADLIEK HNDEIAALET WDNGKPYEQS AQIEVPMLAR VFRYYAGWAD KIHGMTMPGD GPHHVQTLHE PIGVAGQIIP
201: WNFPLLMLSW KLGPALACGN TVVLKTAEQT PLSALLVGKL LHEAGLPDGV VNIVSGFGAT AGAAIASHMD VDKVAFTGST DVGKIILELA SKSNLKAVTL
301: ELGGKSPFIV CEDADVDQAV ELAHFALFFN QGQCCCAGSR TFVHERVYDE FVEKAKARAL KRNVGDPFKS GIEQGPQVDS EQFNKILKYI KHGVEAGATL
401: QAGGDRLGSK GYYIQPTVFS DVKDDMLIAT DEIFGPVQTI LKFKDLDEVI ARANNSRYGL AAGVFTQNLD TAHRLMRALR VGTVWINCFD VLDASIPFGG
501: YKMSGIGREK GIYSLNNYLQ VKAVVTSLKN PAWL

Arabidopsis Description

ALDH2B7Aldehyde dehydrogenase family 2 member B7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8S528]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.