Factsheet for Solyc03g114150.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

plastid: 20363867
plastid: 22908117
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062930	Potato	cytosol	97.76	97.76
KRH03318	Soybean	mitochondrion	69.72	82.71
VIT_17s0000g08070.t01	Wine grape	mitochondrion	82.99	82.53
KRH54419	Soybean	nucleus	80.75	80.0
GSMUA_Achr5P05290_001	Banana	mitochondrion	79.25	78.23
Solyc02g086970.2.1	Tomato	cytosol	68.78	77.8
Solyc05g005700.2.1	Tomato	mitochondrion, unclear	76.45	77.32
AT1G23800.1	Thale cress	mitochondrion	77.01	77.15
KXG19772	Sorghum	mitochondrion	80.0	76.98
CDY57318	Canola	mitochondrion	77.2	76.91
GSMUA_Achr3P06170_001	Banana	mitochondrion	76.26	76.69
TraesCS7A01G210100.1	Wheat	mitochondrion	78.69	76.68
Bra016330.1-P	Field mustard	mitochondrion	76.82	76.54
CDX91724	Canola	mitochondrion	76.82	76.54
TraesCS7D01G211900.1	Wheat	mitochondrion	78.5	76.5
TraesCS7B01G116800.1	Wheat	mitochondrion	78.88	76.45
HORVU7Hr1G042880.1	Barley	mitochondrion	78.32	76.32
Bra024619.1-P	Field mustard	mitochondrion	76.07	75.93
Os06t0270900-01	Rice	mitochondrion	77.76	75.77
Solyc08g068190.2.1	Tomato	nucleus, unclear	75.14	75.28
CDY47634	Canola	mitochondrion	76.26	75.0
KRH63505	Soybean	mitochondrion	61.87	74.55
HORVU6Hr1G072830.2	Barley	peroxisome	71.4	74.46
KXG30827	Sorghum	mitochondrion, plastid	74.77	72.6
TraesCS6B01G321400.1	Wheat	mitochondrion	58.13	72.49
CDY61548	Canola	cytosol, peroxisome	74.95	72.25
TraesCS6D01G272400.1	Wheat	mitochondrion	73.46	72.11
Os02t0730000-02	Rice	mitochondrion	73.64	71.25
Zm00001d045706_P001	Maize	mitochondrion	77.94	71.16
Zm00001d051754_P003	Maize	cytosol	74.21	68.57
Solyc12g007030.1.1	Tomato	cytosol	51.59	55.2
Solyc03g113800.2.1	Tomato	plastid	36.64	38.81
Solyc09g090700.1.1	Tomato	plastid	36.64	37.55
Solyc06g071290.2.1	Tomato	plastid	34.95	37.1
Solyc07g005390.2.1	Tomato	cytosol, extracellular, nucleus, plastid	28.04	30.24
Solyc03g122310.2.1	Tomato	nucleus	25.42	25.61
Solyc12g099290.1.1	Tomato	plastid	26.73	24.11

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004029	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0016491	GO:GO:0016620	GO:GO:0046686	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163
UniProt:K4BKR7	PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF225
SUPFAM:SSF53720	EnsemblPlantsGene:Solyc03g114150.2	EnsemblPlants:Solyc03g114150.2.1	UniParc:UPI00027681BE	SEG:seg	:

Description

No Description!

Coordinates

chr3:+:64169757..64174273

Molecular Weight (calculated)

58338.0 Da

IEP (calculated)

7.814

GRAVY (calculated)

-0.090

Length

535 amino acids

Sequence
(BLAST)

001: MAARRISSLL SRSLNLPSVS ASLGRSHGVA RHINRFSTAA AVEEIITPPV QINHTKLLIN GQFVDSASGK TFPTLDPRTG EVIANVAEGD LEDVNRAVAA
101: ARKAFDEGPW PKMSAYERSR IMLKFADLVE KHNDEIAALE TWDNGKPYLQ AAQAEVPSFV RLFRYYAGWA DKIHGLTVPA DGPHHVQILH EPIGVAGQII
201: PWNFPLLMMA WKVGPALACG NTIVLKTAEQ TPLTALYVAN LLHEAGLPPG VLNIVSGFGP TAGAALASHM DVDKLAFTGS TETGQTVLQL AAKSNLKPVT
301: LELGGKSPFI ICEDADIDHA VELAHFALFF NQGQCCCAGS RTYVHERVYD EFVEKAKARA MRRVVGDPFK KGVEQGPQID SEQFQKILRY IREGRDSSAT
401: LECGGDRIGS KGYFIQPTVF SNVKEDMSIA QDEIFGPVQC VFKFKDIGEV IKRANNTRYG LAAGVFTKNI DTANTLTRGL RAGTVWVNCY DIFDAGIPFG
501: GYKMSGMGRE KGIYSLNNYL QVKAVVTPLK NPAWI

Best Arabidopsis Sequence Match ( AT3G48000.1 )
(BLAST)

001: MAARRVSSLL SRSFSASSPL LFRSQGRNCY NGGILRRFGT SSAAAEEIIN PSVQVSHTQL LINGNFVDSA SGKTFPTLDP RTGEVIAHVA EGDAEDINRA
101: VKAARTAFDE GPWPKMSAYE RSRVLLRFAD LVEKHSEELA SLETWDNGKP YQQSLTAEIP MFARLFRYYA GWADKIHGLT IPADGNYQVH TLHEPIGVAG
201: QIIPWNFPLL MFAWKVGPAL ACGNTIVLKT AEQTPLTAFY AGKLFLEAGL PPGVLNIVSG FGATAGAALA SHMDVDKLAF TGSTDTGKVI LGLAANSNLK
301: PVTLELGGKS PFIVFEDADI DKAVELAHFA LFFNQGQCCC AGSRTFVHEK VYDEFVEKSK ARALKRVVGD PFRKGIEQGP QIDLKQFEKV MKYIKSGIES
401: NATLECGGDQ IGDKGYFIQP TVFSNVKDDM LIAQDEIFGP VQSILKFSDV DEVIKRANET KYGLAAGVFT KNLDTANRVS RALKAGTVWV NCFDVFDAAI
501: PFGGYKMSGN GREKGIYSLN NYLQIKAVVT ALNKPAWI

Arabidopsis Description

ALDH2B4Aldehyde dehydrogenase family 2 member B4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SU63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.