Factsheet for Solyc12g099290.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011970	Potato	endoplasmic reticulum, extracellular, vacuole	98.82	98.82
VIT_05s0077g01060.t01	Wine grape	vacuole	86.17	86.17
KRH50740	Soybean	endoplasmic reticulum	82.97	82.41
KRH02344	Soybean	endoplasmic reticulum	82.46	82.05
Os07t0688800-01	Rice	plasma membrane	81.11	80.57
KRH36977	Soybean	endoplasmic reticulum, extracellular, vacuole	79.26	80.48
GSMUA_Achr11P...	Banana	endoplasmic reticulum	80.1	79.97
Bra029596.1-P	Field mustard	vacuole	79.93	79.93
EER99950	Sorghum	endoplasmic reticulum	79.93	79.93
KRH11951	Soybean	endoplasmic reticulum	80.44	79.9
CDY05285	Canola	vacuole	79.6	79.6
CDY24674	Canola	vacuole	79.6	79.46
AT3G66658.2	Thale cress	endoplasmic reticulum, extracellular, vacuole	79.76	79.36
TraesCS2D01G094400.1	Wheat	golgi	79.43	79.29
TraesCS2A01G096000.1	Wheat	vacuole	79.43	79.29
GSMUA_Achr8P10590_001	Banana	endoplasmic reticulum	78.58	78.32
Zm00001d022554_P003	Maize	endoplasmic reticulum	79.09	78.3
HORVU2Hr1G016040.10	Barley	mitochondrion	76.39	76.91
TraesCS2B01G111400.2	Wheat	vacuole	79.6	72.95
Os07t0689150-00	Rice	endoplasmic reticulum	20.74	66.13
Solyc12g007030.1.1	Tomato	cytosol	24.79	29.4
Solyc06g071290.2.1	Tomato	plastid	24.45	28.77
Solyc02g086970.2.1	Tomato	cytosol	22.93	28.75
Solyc05g005700.2.1	Tomato	mitochondrion, unclear	25.13	28.17
Solyc08g068190.2.1	Tomato	nucleus, unclear	25.13	27.9
Solyc09g090700.1.1	Tomato	plastid	24.28	27.59
Solyc03g113800.2.1	Tomato	plastid	23.44	27.52
Solyc03g114150.2.1	Tomato	plastid	24.11	26.73
Solyc07g005390.2.1	Tomato	cytosol, extracellular, nucleus, plastid	22.09	26.41
Solyc03g122310.2.1	Tomato	nucleus	17.54	19.59

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:35.1	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS
InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004029
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163
UniProt:K4DHV0	PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF25
SUPFAM:SSF53720	EnsemblPlantsGene:Solyc12g099290.1	EnsemblPlants:Solyc12g099290.1.1	TMHMM:TMhelix	UniParc:UPI000276A6BA	:

Description

No Description!

Coordinates

chr12:-:66486772..66493695

Molecular Weight (calculated)

65560.4 Da

IEP (calculated)

7.444

GRAVY (calculated)

0.036

Length

593 amino acids

Sequence
(BLAST)

001: MAFWWPLIVI AIAFAICKLL LMLIPDNVPS IDVDTSDVLD DGNQTKDNSF IYIPSRRHTD KVQCYEPATM KYLGYFPALK PDEVKERVVQ ARKAQKIWAK
101: SSFKQRRLFL RILLKYIIEH QDLICNISSR DTGKTMVDAS LGEIMTTCEK IHWLLSEGEK WLKPEYRSCG RSMLHKVAKV EFSPLGVVGA IVSWNYPFHN
201: IFNPMLAAVF SGNSIVIKVS EHASWSGCFY LRIIQTALAA VGAPENLVEV ITGFAETGEA LVSSVDKIIF VGSPGVGKKI MRSASDTLIP VTLELGGKDA
301: FIVCEDVDVP HVAQIAARGA LQSSGQNCAG AERFYVHKDV YSSFVAEVVK IVKSVTAGPP LSGKYDMGAI CMQEHSERLQ YLVNDALDKG AEIVARGSVG
401: NIGEGAVDQY FPPTVIVNVN HTMKLMQEEA FGPILPIMKF SSDEEVVQLA NDSSYGLGCA VFSGSQRRAR QIASQLHCGV AAVNDFASNY MCQSLPFGGV
501: KDSGFGRFAG IEGLRACCLV KSVVEDRWWP FIKTKIPKPI QYPIAENGFE FQESLVHTLY GLNIWDRLRA LVNVLKILSE QPPAPTSNRR RND

Best Arabidopsis Sequence Match ( AT3G66658.2 )
(BLAST)

001: MPFWWPLIVL AFAYAICKFL LMLIPPNVPS IDVDASDVLA HGKDTEENSF IYIPPRGRSQ QSDKKVQCYE PATMKYLGYF PALSPTEVEE RVTLSRKAQK
101: TWAQSSFKLR RQFLRILLKY IIEHQELICE VSSRDTGKTM VDASLGEIMT TCEKITWLLS EGERWLKPES RSSGRAMLHK VSRVEFHPLG VIGAIVPWNY
201: PFHNIFNPML AAVFSGNGIV IKVSEHASWS GCFYFRIIQA ALAAVGAPEN LVDVITGFAE TGEALVSSVD KMIFVGSTAV GKMIMRNAAE TLTPVTLELG
301: GKDAFIICED ADVSHVAQVA VRGTLQSSGQ NCAGAERFYV HKDIYTAFIG QVTKIVKSVS AGPPLTGRYD MGAICLQEHS EHLQSLVNDA LDKGAEIAVR
401: GSFGHLGEDA VDQYFPPTVL INVNHNMKIM KEEAFGPIMP IMQFSTDEEV IKLANDSRYA LGCAVFSGSK HRAKQIASQI QCGVAAINDF ASNYMCQSLP
501: FGGVKDSGFG RFAGIEGLRA CCLVKSVVED RFWPLIKTKI PKPIQYPVAE NAFEFQEALV ETLYGLNIWD RLRSLIDVLK FLTDQSSNVS RTRKSH

Arabidopsis Description

ALDH22A1Aldehyde dehydrogenase 22A1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WSF1]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.