Factsheet for PGSC0003DMT400083025

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g071290.2.1	Tomato	plastid	96.43	96.43
PGSC0003DMT400063205	Potato	cytosol, peroxisome, plastid	81.35	81.19
KRH57015	Soybean	endoplasmic reticulum	70.83	73.16
AT1G74920.1	Thale cress	cytosol, peroxisome, plastid	72.02	72.46
CDX68159	Canola	plastid	71.23	71.66
Bra003781.1-P	Field mustard	plastid	71.03	71.46
CDX85862	Canola	cytosol, peroxisome, plastid	71.03	71.31
KRH54453	Soybean	endoplasmic reticulum	70.83	70.97
VIT_17s0000g07660.t01	Wine grape	cytosol	34.92	70.68
VIT_17s0000g07650.t01	Wine grape	peroxisome	70.44	70.58
GSMUA_Achr9P16120_001	Banana	peroxisome	70.44	70.3
KXG26485	Sorghum	peroxisome	69.84	69.57
TraesCS2B01G346000.1	Wheat	mitochondrion	42.86	69.45
Zm00001d025626_P002	Maize	mitochondrion	69.64	69.37
Os04t0464200-01	Rice	peroxisome	68.85	68.71
HORVU2Hr1G080970.1	Barley	peroxisome	68.85	68.58
TraesCS2D01G326900.1	Wheat	golgi, unclear	68.65	68.38
Os08t0424500-01	Rice	plastid	68.06	68.19
TraesCS6A01G371100.1	Wheat	golgi, nucleus, unclear	67.06	67.33
TraesCS6B01G408100.1	Wheat	mitochondrion	67.06	67.2
TraesCS6D01G355000.2	Wheat	golgi	66.87	67.0
Zm00001d032257_P001	Maize	extracellular	67.26	67.0
EES13852	Sorghum	peroxisome	67.06	66.93
Zm00001d050339_P001	Maize	extracellular	66.67	66.53
HORVU6Hr1G087460.1	Barley	plastid	66.87	64.07
TraesCS2A01G336000.1	Wheat	peroxisome	69.05	63.97
PGSC0003DMT400000852	Potato	cytosol	41.07	41.4
PGSC0003DMT400044163	Potato	plastid	37.5	36.84
PGSC0003DMT400010555	Potato	mitochondrion	36.9	35.16
PGSC0003DMT400062930	Potato	cytosol	36.9	34.77
PGSC0003DMT400037582	Potato	mitochondrion	38.1	32.32
PGSC0003DMT400010556	Potato	plastid	15.28	32.08
PGSC0003DMT400028915	Potato	cytosol	28.97	29.44
PGSC0003DMT400027691	Potato	mitochondrion	29.96	28.12
PGSC0003DMT400058895	Potato	cytosol	26.98	26.72
PGSC0003DMT400011970	Potato	endoplasmic reticulum, extracellular, vacuole	28.57	24.28

Protein Annotations

EntrezGene:102598406	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:9.4.1.2	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162
InterPro:IPR016163	UniProt:M1D6C7	PFAM:PF00171	EnsemblPlantsGene:PGSC0003DMG400033028	PGSC:PGSC0003DMG400033028	EnsemblPlants:PGSC0003DMT400083025
ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR43860	PANTHER:PTHR43860:SF3	SUPFAM:SSF53720	UniParc:UPI000294CDD5
RefSeq:XP_006354816.1	SEG:seg	:	:	:	:

Description

Betaine aldehyde dehyrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400033028]

Coordinates

chr6:-:52130166..52135413

Molecular Weight (calculated)

54917.0 Da

IEP (calculated)

6.339

GRAVY (calculated)

-0.097

Length

504 amino acids

Sequence
(BLAST)

001: MANRNVPISR RQLYIGGEWR EPVKKNRIPI INPATEEIIG DIPAATAEDV DIAVEAARKA IARDDWGSTT GAQRAKYLRA IAAKVLEKKS VLATLESLDS
101: GKTLFESAAD MDDVAGCFEY YADLAEALDS RRKTPVNLNS DSFKTYVLRE PLGVVGLITP WNYPLLMAIW KVAPALAAGC AAILKPSELA SVTCLELGEI
201: CREIGLPSGA LNILTGLGPE AGGPLASHPH VDKISFTGSG PTGSKIMTAA AQLVKPVSLE LGGKSPIVVF DDIDNLDIAA EWTLFGIFAN TGQVCSATSR
301: LIVQESIASA FLDRLLKWTK NIKISDPLEE DCKLGPVVSA GQYEKVLKFI SNAKSEGATI LYGGKRPQHL KKGYYVQPTI ITDVNTSMEI WKEEVFGPVL
401: CVKTFKTEEE AIELANDTKY GLAAAVMSKD VKRCERFTKA FQTGIIWINC SQPTFNQLPW GGKKRSGFGR DLGEWGLESF LNIKQVTEYT SAEPWAFYKS
501: PSRN

Best Arabidopsis Sequence Match ( AT1G74920.1 )
(BLAST)

001: MAIPMPTRQL FIDGEWREPI LKKRIPIVNP ATEEVIGDIP AATTEDVDVA VNAARRALSR NKGKDWAKAP GAVRAKYLRA IAAKVNERKT DLAKLEALDC
101: GKPLDEAVWD MDDVAGCFEF YADLAEGLDA KQKAPVSLPM ESFKSYVLKQ PLGVVGLITP WNYPLLMAVW KVAPSLAAGC TAILKPSELA SVTCLELADI
201: CREVGLPPGV LNVLTGFGSE AGAPLASHPG VDKIAFTGSF ATGSKVMTAA AQLVKPVSME LGGKSPLIVF DDVDLDKAAE WALFGCFWTN GQICSATSRL
301: LVHESIASEF IEKLVKWSKN IKISDPMEEG CRLGPVVSKG QYEKILKFIS TAKSEGATIL HGGSRPEHLE KGFFIEPTII TDVTTSMQIW REEVFGPVLC
401: VKTFASEDEA IELANDSHYG LGAAVISNDT ERCDRISEAF EAGIVWINCS QPCFTQAPWG GVKRSGFGRE LGEWGLDNYL SVKQVTLYTS NDPWGWYKSP
501: N

Arabidopsis Description

ALDH10A8ALDH10A8 [Source:UniProtKB/TrEMBL;Acc:A0A178W4Y2]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.