CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

plastid 3
peroxisome 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019528.1-P	Field mustard	mitochondrion	99.2	99.2
CDX77890	Canola	mitochondrion, peroxisome	98.41	98.41
AT3G48170.1	Thale cress	mitochondrion, peroxisome	93.84	93.84
CDX68159	Canola	plastid	78.73	79.04
CDX85862	Canola	cytosol, peroxisome, plastid	78.53	78.69
CDY21806	Canola	cytosol	41.35	41.94
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	41.15	41.32
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	40.76	40.92
CDY44985	Canola	mitochondrion	43.54	40.71
CDY36910	Canola	mitochondrion	43.34	40.45
CDY57318	Canola	mitochondrion	40.16	37.62
CDX91724	Canola	mitochondrion	39.96	37.43
CDY47634	Canola	mitochondrion	39.56	36.58
CDY61548	Canola	cytosol, peroxisome	39.16	35.5
CDX88542	Canola	mitochondrion	37.38	34.0
CDX77883	Canola	mitochondrion	38.57	33.92
CDX87380	Canola	mitochondrion	37.18	33.88
CDY46134	Canola	peroxisome	19.09	30.0
CDY20292	Canola	cytosol	29.62	29.62
CDY55249	Canola	cytosol	25.65	29.39
CDY34779	Canola	peroxisome	29.03	29.03
CDY51401	Canola	cytosol	11.93	27.27
CDY37216	Canola	mitochondrion	28.03	26.76
CDX81452	Canola	mitochondrion	28.03	26.76
CDY61473	Canola	cytosol, peroxisome, plastid	26.64	26.59
CDY02483	Canola	cytosol, peroxisome, plastid	26.24	25.68
CDY05285	Canola	vacuole	28.43	24.11
CDY24674	Canola	vacuole	28.43	24.07
CDY55250	Canola	nucleus	3.18	22.22

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:9.4.1.2	GO:A0A078G8T8	UniProt:A0A078G8T8	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlants:CDY21809
ProteinID:CDY21809	ProteinID:CDY21809.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00016360001	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR43860	PANTHER:PTHR43860:SF3	SUPFAM:SSF53720
UniParc:UPI0001CDD6BF	:	:	:	:	:

Description

BnaA06g20780DBnaA06g20780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8T8]

Coordinates

chrLK032124:-:464362..468084

Molecular Weight (calculated)

54762.9 Da

IEP (calculated)

6.193

GRAVY (calculated)

-0.043

Length

503 amino acids

Sequence
(BLAST)

001: MAITVPRRQL FIGGQWTEPL RRQTLPVVNP ATEDIIGYIP AATSEDVELA VEAARKALTR NQGKDWSKAS GAVRARYLRA IAAKVTERKS ELANLEAIDC
101: GKPLDEAAWD MDDVAGCFEY YADLAQGLDS KQKAPLSLPL DTFKGYVLKE PIGVVGLITP WNYPLLMAVW KVAPALAAGC TAILKPSELA SVTCLELADI
201: CREVGLPPGV LNILTGLGTE AGAPLASHPH VDKIVFTGST ATGSNIMTSA AKLVKPVSLE LGGKSPIIVF DDVKIDKAVE WTMFGCFWTN GQICSATSRL
301: LVHEKIADEF LDKLVKWTKN IKISDPFEEG CRLGPVVSKG QYERVVKFVS NARKEGATVL CGGARPGHLK KGYFVEPAII SNVTTSMEIW RDEVFGPVLC
401: VKTFSTEDEA IQLANDSQYG LAGAVLSNDL ERCDRVSKAF EAGIVWVNCS QPCFCQAPWG GTKRSGFGRE LGEWGLENYL SVKQVTQYIS NEPWGWYKPP
501: SKL

Best Arabidopsis Sequence Match ( AT3G48170.1 )
(BLAST)

001: MAITVPRRQL FIGGQWTEPV LRKTLPVVNP ATEDIIGYIP AATSEDVELA VEAARKAFTR NNGKDWARAT GAVRAKYLRA IAAKVIERKS ELANLEAIDC
101: GKPLDEAAWD MDDVAGCFEY YADLAEGLDA KQKTPLSLPM DTFKGYILKE PIGVVGMITP WNYPLLMAVW KVAPSLAAGC TAILKPSELA SLTCLELADI
201: CREVGLPPGV LNILTGLGTE AGAPLASHPH VDKIVFTGST TTGSSIMTSA AKLVKPVSLE LGGKSPIIVF DDVDIDKAVE WTMFGCFWTN GQICSATSRL
301: LVHERIADEF LDKLVKWTKN IKISDPFEEG CRLGPVVSKG QYERVLKFVS NARNEGATVL CGGVRPEHLK KGYFVEPAIV SNVTTSMEIW REEVFGPALC
401: VKTFSTEDEA IQLANDSQYG LAGAVLSNDL ERCDRVSKAF QAGIVWVNCS QPCFCQAPWG GTKRSGFGRE LGEWGLENYL SVKQVTQYIS DEPWGWYKPP
501: SKL

Arabidopsis Description

ALDH10A9Betaine aldehyde dehydrogenase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9STS1]
SUBAcon: [mitochondrion,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.