CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36910	Canola	mitochondrion	99.07	98.89
CDY21806	Canola	cytosol	84.94	92.14
AT3G48000.1	Thale cress	mitochondrion	91.64	91.64
CDX77883	Canola	mitochondrion	85.69	80.59
CDY57318	Canola	mitochondrion	74.72	74.86
CDX91724	Canola	mitochondrion	74.72	74.86
CDY47634	Canola	mitochondrion	75.09	74.26
CDY61548	Canola	cytosol, peroxisome	73.42	71.17
CDX93017	Canola	cytoskeleton, cytosol, peroxisome	51.12	54.89
CDX94807	Canola	cytoskeleton, cytosol, peroxisome	50.74	54.49
CDY21809	Canola	mitochondrion, peroxisome	40.71	43.54
CDX77890	Canola	mitochondrion, peroxisome	40.52	43.34
CDX68159	Canola	plastid	38.29	41.12
CDX85862	Canola	cytosol, peroxisome, plastid	38.1	40.84
CDX87380	Canola	mitochondrion	36.8	35.87
CDX88542	Canola	mitochondrion	36.8	35.8
CDY46134	Canola	peroxisome	18.96	31.88
CDY37216	Canola	mitochondrion	29.0	29.6
CDY20292	Canola	cytosol	27.51	29.42
CDX81452	Canola	mitochondrion	28.81	29.41
CDY34779	Canola	peroxisome	26.95	28.83
CDY55249	Canola	cytosol	23.42	28.7
CDY61473	Canola	cytosol, peroxisome, plastid	24.91	26.59
CDY55250	Canola	nucleus	3.53	26.39
CDY51401	Canola	cytosol	10.78	26.36
CDY02483	Canola	cytosol, peroxisome, plastid	25.09	26.26
CDY05285	Canola	vacuole	26.95	24.45
CDY24674	Canola	vacuole	26.95	24.41

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:50.1.2	GO:A0A078I2C5	UniProt:A0A078I2C5	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlants:CDY44985
ProteinID:CDY44985	ProteinID:CDY44985.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00081175001	InterPro:IPR016162	InterPro:IPR016163
PFAM:PF00171	ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR11699	PANTHER:PTHR11699:SF225	SUPFAM:SSF53720
UniParc:UPI0004EDE40F	SEG:seg	:	:	:	:

Description

BnaCnng12150DBnaCnng12150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2C5]

Coordinates

chrLK032608:+:93786..96697

Molecular Weight (calculated)

58480.9 Da

IEP (calculated)

7.844

GRAVY (calculated)

-0.091

Length

538 amino acids

Sequence
(BLAST)

001: MAARRVSSLL PRSFSASSPF LSRSQGRNLN NGSRIVRRFG TSSAAEEVIS PSVQVSYTKL LIDGNFVDAA SGKTFPTLDP RTGEVIAHVA EGDAEDVNRA
101: VKAARKAFDE GPWPKMTAYE RSRVMLRFAD LVEKHSEELA ALESWDNGKT YEQALTAEIP MVARLFRYYA GWADKIHGLT VPADGNYHVQ TLHEPIGVAG
201: QIIPWNFPLL MFAWKVGPAL ACGNTIVLKT AEQTPLTAFY VGKLFLEAGL PPGVLNIVSG FGATAGASLA SHMDVDKLAF TGSTDTGKVI LGLAANSNLK
301: PVTLELGGKS PFIVFEDADI DKAVELAHFA LFFNQGQCCC AGSRTYVHEK VYDEFVEKAK ARALKRVVGD PFKKGIEQGP QVDSKQFEKV MKYIRSGVES
401: NATLECGGGQ VGDRGYFIQP TVFSNVKDDM LIAQDEIFGP VQSILKFSDV DEVIKRANDT RYGLAAGVFT KSLDTANRVS RALKAGTVWV NCFDVFDAAI
501: PFGGYKMSGN GREKGIYSLN NYLQVKAVVT PLNNPAWI

Best Arabidopsis Sequence Match ( AT3G48000.1 )
(BLAST)

001: MAARRVSSLL SRSFSASSPL LFRSQGRNCY NGGILRRFGT SSAAAEEIIN PSVQVSHTQL LINGNFVDSA SGKTFPTLDP RTGEVIAHVA EGDAEDINRA
101: VKAARTAFDE GPWPKMSAYE RSRVLLRFAD LVEKHSEELA SLETWDNGKP YQQSLTAEIP MFARLFRYYA GWADKIHGLT IPADGNYQVH TLHEPIGVAG
201: QIIPWNFPLL MFAWKVGPAL ACGNTIVLKT AEQTPLTAFY AGKLFLEAGL PPGVLNIVSG FGATAGAALA SHMDVDKLAF TGSTDTGKVI LGLAANSNLK
301: PVTLELGGKS PFIVFEDADI DKAVELAHFA LFFNQGQCCC AGSRTFVHEK VYDEFVEKSK ARALKRVVGD PFRKGIEQGP QIDLKQFEKV MKYIKSGIES
401: NATLECGGDQ IGDKGYFIQP TVFSNVKDDM LIAQDEIFGP VQSILKFSDV DEVIKRANET KYGLAAGVFT KNLDTANRVS RALKAGTVWV NCFDVFDAAI
501: PFGGYKMSGN GREKGIYSLN NYLQIKAVVT ALNKPAWI

Arabidopsis Description

ALDH2B4Aldehyde dehydrogenase family 2 member B4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SU63]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.