Factsheet for VIT_03s0132g00230.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0132g00200.t01	Wine grape	mitochondrion	55.19	59.18
CDX81452	Canola	mitochondrion	52.42	57.5
Bra037214.1-P	Field mustard	mitochondrion	51.9	56.93
CDY37216	Canola	mitochondrion	51.73	56.74
GSMUA_Achr4P22360_001	Banana	mitochondrion	52.08	55.95
PGSC0003DMT400027691	Potato	mitochondrion	50.87	54.75
Os07t0188800-01	Rice	mitochondrion	49.83	53.93
TraesCS2A01G477900.1	Wheat	mitochondrion	48.96	53.1
TraesCS2D01G477100.2	Wheat	golgi, mitochondrion	48.96	53.0
EER95994	Sorghum	mitochondrion	49.48	52.96
TraesCS2B01G501200.1	Wheat	golgi, mitochondrion, unclear	48.79	52.81
AT2G14170.1	Thale cress	mitochondrion	55.19	52.55
Zm00001d019054_P001	Maize	mitochondrion	48.79	52.51
HORVU2Hr1G107550.1	Barley	plasma membrane	48.96	48.79
HORVU2Hr1G107520.1	Barley	cytosol, peroxisome	23.18	42.01
VIT_00s0218g00070.t01	Wine grape	cytosol	72.15	30.22
VIT_17s0000g08070.t01	Wine grape	mitochondrion	20.07	21.56
VIT_14s0066g01550.t01	Wine grape	mitochondrion	19.38	20.93
VIT_01s0026g00220.t01	Wine grape	mitochondrion	19.55	20.73
VIT_17s0000g07650.t01	Wine grape	peroxisome	17.3	19.88
VIT_19s0085g00860.t01	Wine grape	cytosol, mitochondrion, peroxisome	16.26	19.58
VIT_11s0037g00070.t01	Wine grape	cytosol	16.61	19.35
VIT_04s0008g05810.t01	Wine grape	cytosol	16.61	19.35
VIT_19s0085g00870.t01	Wine grape	cytosol	16.09	18.86
VIT_19s0085g00880.t01	Wine grape	plastid	17.13	18.68
VIT_01s0137g00080.t01	Wine grape	cytosol	12.63	18.43
VIT_14s0066g02410.t01	Wine grape	cytosol, peroxisome, plastid	15.57	18.07
VIT_01s0026g00210.t01	Wine grape	cytosol	16.26	16.01
VIT_11s0016g00900.t01	Wine grape	cytosol	14.01	15.94
VIT_09s0002g01010.t01	Wine grape	cytosol	12.11	15.49
VIT_05s0077g01060.t01	Wine grape	vacuole	13.67	13.32
VIT_17s0000g07660.t01	Wine grape	cytosol	5.71	13.25

Protein Annotations

KEGG:00280+1.2.1.27	KEGG:00640+1.2.1.27	EntrezGene:100261145	wikigene:100261145	Gene3D:3.40.309.10	Gene3D:3.40.605.10
MapMan:4.2.7.6.3	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	ProteinID:CCB52360
ProteinID:CCB52360.1	UniProt:F6HJG1	EMBL:FN595773	GO:GO:0003674	GO:GO:0003824	GO:GO:0004491
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620	GO:GO:0055114	InterPro:IPR016162
InterPro:IPR016163	EntrezGene:LOC100261145	wikigene:LOC100261145	InterPro:MeMal-semiAld_DH	PFAM:PF00171	PANTHER:PTHR43866
PANTHER:PTHR43866:SF6	SUPFAM:SSF53720	TIGRFAMs:TIGR01722	UniParc:UPI0002108AD4	ArrayExpress:VIT_03s0132g00230	EnsemblPlantsGene:VIT_03s0132g00230
EnsemblPlants:VIT_03s0132g00230.t01	RefSeq:XP_002266616	RefSeq:XP_002266616.2	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:-:11685127..11703165

Molecular Weight (calculated)

63862.1 Da

IEP (calculated)

9.215

GRAVY (calculated)

-0.199

Length

578 amino acids

Sequence
(BLAST)

001: MLPPPPGSFI DREELIQHVG DFALSQGYVV TIKQSKKDKV VVLGCDRGGV YRNRRKLVDE SSAEQVRKRK TGSRLTNCPF EVVGKKEDGL WVLAIKNGEH
101: NHDPIRDISE HPSSRRFTER EVLLIKDMTE AGLKPRQILK RLRQNNPELL STPKHVYNVK AKLRQGNLTV RNFKSLRVKS SVENSHISTA NEPSWRQRNP
201: PRVPNLIGGR FVDSQSFASI DVTNPATQKV VSQVPLTTNE EFRAAIFAAK RAFPSWRDTP VTTRQRIMFK FQELIRRDID KIAMNITTEH GKTLKDAYTD
301: VHRGLEVVEH ACGMATLQMG EFVSNVSNGI DTYSIREPLG VCAGICPFDF PAMIPLWMFP IAVTCGNTFI LKPSEKDPGA TIILAELAME AGLPNGVLNI
401: VHGTVDIINA ICDDDDIKAI SFVGSNTDGM YIYARASAKG KRVQSNIGAK NHAIVMPDAS KDATLNALVS AGFGAAGQRC MVLSTVVFVG GSKSWEDKLV
501: ECAKALKVNA GIEPDADLGP VISKQVKERI CRLIQAGVDS GARLVLDGRN IEACLTTYLS MIILLDFFWS NQSFSYIP

Best Arabidopsis Sequence Match ( AT2G14170.1 )
(BLAST)

001: MVRVKQKNLE SYRSNGTYPP TWRNPTTSFA PDQHRVSIHS SLKSKTKRRR LYKEADDNTK LRSSSSTTTT TTTMLLRISG NNLRPLRPQF LALRSSWLST
101: SPEQSTQPQM PPRVPNLIGG SFVESQSSSF IDVINPATQE VVSKVPLTTN EEFKAAVSAA KQAFPLWRNT PITTRQRVML KFQELIRKNM DKLAMNITTE
201: QGKTLKDSHG DIFRGLEVVE HACGMATLQM GEYLPNVSNG VDTYSIREPL GVCAGICPFN FPAMIPLWMF PVAVTCGNTF ILKPSEKDPG ASVILAELAM
301: EAGLPDGVLN IVHGTNDTVN AICDDEDIRA VSFVGSNTAG MHIYARAAAK GKRIQSNMGA KNHGLVLPDA NIDATLNALL AAGFGAAGQR CMALSTVVFV
401: GDAKSWEDKL VERAKALKVT CGSEPDADLG PVISKQAKER ICRLIQSGVD DGAKLLLDGR DIVVPGYEKG NFIGPTILSG VTPDMECYKE EIFGPVLVCM
501: QANSFDEAIS IINKNKYGNG AAIFTSSGAA ARKFQMDIEA GQIGINVPIP VPLPFFSFTG NKASFAGDLN FYGKAGVDFF TQIKTVTQQW KDIPTSVSLA
601: MPTSQKQ

Arabidopsis Description

ALDH6B2Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WM29]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.