Factsheet for VIT_04s0008g05810.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0037g00070.t01	Wine grape	cytosol	88.91	88.91
EES13911	Sorghum	cytosol	88.51	88.15
HORVU2Hr1G036110.7	Barley	cytosol	88.1	88.1
KRH05288	Soybean	cytosol	88.1	88.1
GSMUA_Achr7P19330_001	Banana	cytosol	88.1	87.93
TraesCS2B01G216400.1	Wheat	cytosol	87.7	87.7
TraesCS2A01G190700.1	Wheat	cytosol	87.5	87.5
TraesCS2D01G197300.1	Wheat	golgi	87.5	87.5
Os08t0440800-01	Rice	extracellular, plasma membrane	87.5	86.97
Zm00001d050428_P003	Maize	cytosol	87.9	86.17
GSMUA_Achr6P01980_001	Banana	cytosol	86.09	86.09
VIT_17s0000g07650.t01	Wine grape	peroxisome	30.04	29.62
VIT_14s0066g02410.t01	Wine grape	cytosol, peroxisome, plastid	29.44	29.32
VIT_01s0137g00080.t01	Wine grape	cytosol	22.18	27.78
VIT_14s0066g01550.t01	Wine grape	mitochondrion	29.64	27.48
VIT_17s0000g08070.t01	Wine grape	mitochondrion	29.64	27.32
VIT_17s0000g07660.t01	Wine grape	cytosol	13.51	26.91
VIT_19s0085g00860.t01	Wine grape	cytosol, mitochondrion, peroxisome	26.01	26.88
VIT_01s0026g00220.t01	Wine grape	mitochondrion	29.03	26.42
VIT_19s0085g00880.t01	Wine grape	plastid	27.82	26.04
VIT_19s0085g00870.t01	Wine grape	cytosol	24.8	24.95
VIT_03s0132g00200.t01	Wine grape	mitochondrion	26.21	24.12
VIT_11s0016g00900.t01	Wine grape	cytosol	23.59	23.03
VIT_01s0026g00210.t01	Wine grape	cytosol	26.21	22.15
VIT_05s0077g01060.t01	Wine grape	vacuole	25.6	21.42
VIT_09s0002g01010.t01	Wine grape	cytosol	18.55	20.35
VIT_03s0132g00230.t01	Wine grape	cytosol	19.35	16.61
VIT_00s0218g00070.t01	Wine grape	cytosol	25.81	9.28

Protein Annotations

EntrezGene:100249114	wikigene:100249114	MapMan:2.1.1.4.2	Gene3D:3.40.309.10	Gene3D:3.40.605.10	EMBL:AM460792
InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_CS_GLU	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom
ProteinID:CAN63539	ProteinID:CAN63539.1	ProteinID:CBI21073	ProteinID:CBI21073.3	UniProt:D7SUX4	EMBL:FN595231
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	EntrezGene:LOC100249114	wikigene:LOC100249114	PFAM:PF00171
ScanProsite:PS00070	ScanProsite:PS00687	PANTHER:PTHR42991	PANTHER:PTHR42991:SF3	SUPFAM:SSF53720	TIGR:TC60743
UniParc:UPI00015C875C	ArrayExpress:VIT_04s0008g05810	EnsemblPlantsGene:VIT_04s0008g05810	EnsemblPlants:VIT_04s0008g05810.t01	unigene:Vvi.909	RefSeq:XP_002285286
RefSeq:XP_002285286.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:5399435..5403768

Molecular Weight (calculated)

53143.4 Da

IEP (calculated)

6.507

GRAVY (calculated)

0.036

Length

496 amino acids

Sequence
(BLAST)

001: MAGSGVFAEI LDGDVFKYYT DGAWKTSSSG KSVPIINPTT RSTQYKVQAC TQEEVNKVME TAKNAQKLWA KTPLWKRAEL LHKAAAILKE QKAPIAECLV
101: KEIAKPAKDA VTEVVRSGDL VSYCAEEGVR ILGEGKFLVS DSFPGNERSK YCLTSKIPLG VILAIPPFNY PVNLAVSKIG PALIAGNSLV LKPPTQGAVA
201: ALHMVHCFHL AGFPKGLINC VTGRGSEIGD FLTMHPGVDC ISFTGGDTGI AISKKAGMVP LQMELGGKDA CIILEDADLD LAASSIVKGG FSYSGQRCTA
301: IKVVLVMESV ADALVEKVNV KLAKLTVGAP EDDCDITPVV TESSANFIEG LITDAKQKEA TFCQEYKREG NLIYPLLLDN VRPDMRIAWE EPFGPVLPVI
401: RINSVEEGIH HCNASNFGLQ GCIFTRDINK AILIGDAMET GTVQINSAPA RGPDHFPFQG FKDSGIGSQG ITNSINMMTK TKSMVINLPT PTYSMG

Best Arabidopsis Sequence Match ( AT2G24270.2 )
(BLAST)

001: MLFHHSFHKN LSIITSSLSL SLLYNTQEAR HRGEILFQRS MAGTGLFAEI LDGEVYKYYA DGEWKTSSSG KSVAIMNPAT RKTQYKVQAC TQEEVNAVME
101: LAKSAQKSWA KTPLWKRAEL LHKAAAILKD NKAPMAESLV KEIAKPAKDS VTEVVRSGDL ISYCAEEGVR ILGEGKFLLS DSFPGNDRTK YCLTSKIPLG
201: VVLAIPPFNY PVNLAVSKIA PALIAGNSLV LKPPTQGAVS CLHMVHCFHL AGFPKGLISC ITGKGSEIGD FLTMHPAVNC ISFTGGDTGI SISKKAGMIP
301: LQMELGGKDA CIVLDDADLD LVASNIIKGG FSYSGQRCTA VKVVLVMESV ADELVEKVKA KVAKLTVGPP EENSDITAVV SESSANFIEG LVMDAKEKGA
401: TFCQEYKREG NLIWPLLLDN VRPDMRIAWE EPFGPVVPVL RINSVEEGIN HCNASNFGLQ GCVFTKDINK AILISDAMET GTVQINSAPA RGPDHFPFQG
501: LKDSGIGSQG VTNSINLMTK VKTTVINLPT PSYSMG

Arabidopsis Description

ALDH11A3aldehyde dehydrogenase 11A3 [Source:TAIR;Acc:AT2G24270]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.